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Genome Mining and Molecular Networking-Based Metabolomics of the Marine Facultative Aspergillus sp. MEXU 27854
The marine-facultative Aspergillus sp. MEXU 27854, isolated from the Caleta Bay in Acapulco, Guerrero, Mexico, has provided an interesting diversity of secondary metabolites, including a series of rare dioxomorpholines, peptides, and butyrolactones. Here, we report on the genomic data, which consist...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8433890/ https://www.ncbi.nlm.nih.gov/pubmed/34500798 http://dx.doi.org/10.3390/molecules26175362 |
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author | Martínez-Cárdenas, Anahí Cruz-Zamora, Yuridia Fajardo-Hernández, Carlos A. Villanueva-Silva, Rodrigo Cruz-García, Felipe Raja, Huzefa A. Figueroa, Mario |
author_facet | Martínez-Cárdenas, Anahí Cruz-Zamora, Yuridia Fajardo-Hernández, Carlos A. Villanueva-Silva, Rodrigo Cruz-García, Felipe Raja, Huzefa A. Figueroa, Mario |
author_sort | Martínez-Cárdenas, Anahí |
collection | PubMed |
description | The marine-facultative Aspergillus sp. MEXU 27854, isolated from the Caleta Bay in Acapulco, Guerrero, Mexico, has provided an interesting diversity of secondary metabolites, including a series of rare dioxomorpholines, peptides, and butyrolactones. Here, we report on the genomic data, which consists of 11 contigs (N50~3.95 Mb) with a ~30.75 Mb total length of assembly. Genome annotation resulted in the prediction of 10,822 putative genes. Functional annotation was accomplished by BLAST searching protein sequences with different public databases. Of the predicted genes, 75% were assigned gene ontology terms. From the 67 BGCs identified, ~60% belong to the NRPS and NRPS-like classes. Putative BGCs for the dioxomorpholines and other metabolites were predicted by extensive genome mining. In addition, metabolomic molecular networking analysis allowed the annotation of all isolated compounds and revealed the biosynthetic potential of this fungus. This work represents the first report of whole-genome sequencing and annotation from a marine-facultative fungal strain isolated from Mexico. |
format | Online Article Text |
id | pubmed-8433890 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-84338902021-09-12 Genome Mining and Molecular Networking-Based Metabolomics of the Marine Facultative Aspergillus sp. MEXU 27854 Martínez-Cárdenas, Anahí Cruz-Zamora, Yuridia Fajardo-Hernández, Carlos A. Villanueva-Silva, Rodrigo Cruz-García, Felipe Raja, Huzefa A. Figueroa, Mario Molecules Article The marine-facultative Aspergillus sp. MEXU 27854, isolated from the Caleta Bay in Acapulco, Guerrero, Mexico, has provided an interesting diversity of secondary metabolites, including a series of rare dioxomorpholines, peptides, and butyrolactones. Here, we report on the genomic data, which consists of 11 contigs (N50~3.95 Mb) with a ~30.75 Mb total length of assembly. Genome annotation resulted in the prediction of 10,822 putative genes. Functional annotation was accomplished by BLAST searching protein sequences with different public databases. Of the predicted genes, 75% were assigned gene ontology terms. From the 67 BGCs identified, ~60% belong to the NRPS and NRPS-like classes. Putative BGCs for the dioxomorpholines and other metabolites were predicted by extensive genome mining. In addition, metabolomic molecular networking analysis allowed the annotation of all isolated compounds and revealed the biosynthetic potential of this fungus. This work represents the first report of whole-genome sequencing and annotation from a marine-facultative fungal strain isolated from Mexico. MDPI 2021-09-03 /pmc/articles/PMC8433890/ /pubmed/34500798 http://dx.doi.org/10.3390/molecules26175362 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Martínez-Cárdenas, Anahí Cruz-Zamora, Yuridia Fajardo-Hernández, Carlos A. Villanueva-Silva, Rodrigo Cruz-García, Felipe Raja, Huzefa A. Figueroa, Mario Genome Mining and Molecular Networking-Based Metabolomics of the Marine Facultative Aspergillus sp. MEXU 27854 |
title | Genome Mining and Molecular Networking-Based Metabolomics of the Marine Facultative Aspergillus sp. MEXU 27854 |
title_full | Genome Mining and Molecular Networking-Based Metabolomics of the Marine Facultative Aspergillus sp. MEXU 27854 |
title_fullStr | Genome Mining and Molecular Networking-Based Metabolomics of the Marine Facultative Aspergillus sp. MEXU 27854 |
title_full_unstemmed | Genome Mining and Molecular Networking-Based Metabolomics of the Marine Facultative Aspergillus sp. MEXU 27854 |
title_short | Genome Mining and Molecular Networking-Based Metabolomics of the Marine Facultative Aspergillus sp. MEXU 27854 |
title_sort | genome mining and molecular networking-based metabolomics of the marine facultative aspergillus sp. mexu 27854 |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8433890/ https://www.ncbi.nlm.nih.gov/pubmed/34500798 http://dx.doi.org/10.3390/molecules26175362 |
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