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Genome Mining and Molecular Networking-Based Metabolomics of the Marine Facultative Aspergillus sp. MEXU 27854

The marine-facultative Aspergillus sp. MEXU 27854, isolated from the Caleta Bay in Acapulco, Guerrero, Mexico, has provided an interesting diversity of secondary metabolites, including a series of rare dioxomorpholines, peptides, and butyrolactones. Here, we report on the genomic data, which consist...

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Autores principales: Martínez-Cárdenas, Anahí, Cruz-Zamora, Yuridia, Fajardo-Hernández, Carlos A., Villanueva-Silva, Rodrigo, Cruz-García, Felipe, Raja, Huzefa A., Figueroa, Mario
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8433890/
https://www.ncbi.nlm.nih.gov/pubmed/34500798
http://dx.doi.org/10.3390/molecules26175362
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author Martínez-Cárdenas, Anahí
Cruz-Zamora, Yuridia
Fajardo-Hernández, Carlos A.
Villanueva-Silva, Rodrigo
Cruz-García, Felipe
Raja, Huzefa A.
Figueroa, Mario
author_facet Martínez-Cárdenas, Anahí
Cruz-Zamora, Yuridia
Fajardo-Hernández, Carlos A.
Villanueva-Silva, Rodrigo
Cruz-García, Felipe
Raja, Huzefa A.
Figueroa, Mario
author_sort Martínez-Cárdenas, Anahí
collection PubMed
description The marine-facultative Aspergillus sp. MEXU 27854, isolated from the Caleta Bay in Acapulco, Guerrero, Mexico, has provided an interesting diversity of secondary metabolites, including a series of rare dioxomorpholines, peptides, and butyrolactones. Here, we report on the genomic data, which consists of 11 contigs (N50~3.95 Mb) with a ~30.75 Mb total length of assembly. Genome annotation resulted in the prediction of 10,822 putative genes. Functional annotation was accomplished by BLAST searching protein sequences with different public databases. Of the predicted genes, 75% were assigned gene ontology terms. From the 67 BGCs identified, ~60% belong to the NRPS and NRPS-like classes. Putative BGCs for the dioxomorpholines and other metabolites were predicted by extensive genome mining. In addition, metabolomic molecular networking analysis allowed the annotation of all isolated compounds and revealed the biosynthetic potential of this fungus. This work represents the first report of whole-genome sequencing and annotation from a marine-facultative fungal strain isolated from Mexico.
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spelling pubmed-84338902021-09-12 Genome Mining and Molecular Networking-Based Metabolomics of the Marine Facultative Aspergillus sp. MEXU 27854 Martínez-Cárdenas, Anahí Cruz-Zamora, Yuridia Fajardo-Hernández, Carlos A. Villanueva-Silva, Rodrigo Cruz-García, Felipe Raja, Huzefa A. Figueroa, Mario Molecules Article The marine-facultative Aspergillus sp. MEXU 27854, isolated from the Caleta Bay in Acapulco, Guerrero, Mexico, has provided an interesting diversity of secondary metabolites, including a series of rare dioxomorpholines, peptides, and butyrolactones. Here, we report on the genomic data, which consists of 11 contigs (N50~3.95 Mb) with a ~30.75 Mb total length of assembly. Genome annotation resulted in the prediction of 10,822 putative genes. Functional annotation was accomplished by BLAST searching protein sequences with different public databases. Of the predicted genes, 75% were assigned gene ontology terms. From the 67 BGCs identified, ~60% belong to the NRPS and NRPS-like classes. Putative BGCs for the dioxomorpholines and other metabolites were predicted by extensive genome mining. In addition, metabolomic molecular networking analysis allowed the annotation of all isolated compounds and revealed the biosynthetic potential of this fungus. This work represents the first report of whole-genome sequencing and annotation from a marine-facultative fungal strain isolated from Mexico. MDPI 2021-09-03 /pmc/articles/PMC8433890/ /pubmed/34500798 http://dx.doi.org/10.3390/molecules26175362 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Martínez-Cárdenas, Anahí
Cruz-Zamora, Yuridia
Fajardo-Hernández, Carlos A.
Villanueva-Silva, Rodrigo
Cruz-García, Felipe
Raja, Huzefa A.
Figueroa, Mario
Genome Mining and Molecular Networking-Based Metabolomics of the Marine Facultative Aspergillus sp. MEXU 27854
title Genome Mining and Molecular Networking-Based Metabolomics of the Marine Facultative Aspergillus sp. MEXU 27854
title_full Genome Mining and Molecular Networking-Based Metabolomics of the Marine Facultative Aspergillus sp. MEXU 27854
title_fullStr Genome Mining and Molecular Networking-Based Metabolomics of the Marine Facultative Aspergillus sp. MEXU 27854
title_full_unstemmed Genome Mining and Molecular Networking-Based Metabolomics of the Marine Facultative Aspergillus sp. MEXU 27854
title_short Genome Mining and Molecular Networking-Based Metabolomics of the Marine Facultative Aspergillus sp. MEXU 27854
title_sort genome mining and molecular networking-based metabolomics of the marine facultative aspergillus sp. mexu 27854
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8433890/
https://www.ncbi.nlm.nih.gov/pubmed/34500798
http://dx.doi.org/10.3390/molecules26175362
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