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A–X⋯σ Interactions—Halogen Bonds with σ-Electrons as the Lewis Base Centre
CCSD(T)/aug-cc-pVTZ//ωB97XD/aug-cc-pVTZ calculations were performed for halogen-bonded complexes. Here, the molecular hydrogen, cyclopropane, cyclobutane and cyclopentane act as Lewis base units that interact through the electrons of the H–H or C–C σ-bond. The FCCH, ClCCH, BrCCH and ICCH species, as...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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MDPI
2021
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8434224/ https://www.ncbi.nlm.nih.gov/pubmed/34500610 http://dx.doi.org/10.3390/molecules26175175 |
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author | Grabowski, Sławomir J. |
author_facet | Grabowski, Sławomir J. |
author_sort | Grabowski, Sławomir J. |
collection | PubMed |
description | CCSD(T)/aug-cc-pVTZ//ωB97XD/aug-cc-pVTZ calculations were performed for halogen-bonded complexes. Here, the molecular hydrogen, cyclopropane, cyclobutane and cyclopentane act as Lewis base units that interact through the electrons of the H–H or C–C σ-bond. The FCCH, ClCCH, BrCCH and ICCH species, as well as the F(2), Cl(2), Br(2) and I(2) molecular halogens, act as Lewis acid units in these complexes, interacting through the σ-hole localised at the halogen centre. The Quantum Theory of Atoms in Molecules (QTAIM), the Natural Bond Orbital (NBO) and the Energy Decomposition Analysis (EDA) approaches were applied to analyse these aforementioned complexes. These complexes may be classified as linked by A–X···σ halogen bonds, where A = C, X (halogen). However, distinct properties of these halogen bonds are observed that depend partly on the kind of electron donor: dihydrogen, cyclopropane, or another cycloalkane. Examples of similar interactions that occur in crystals are presented; Cambridge Structural Database (CSD) searches were carried out to find species linked by the A–X···σ halogen bonds. |
format | Online Article Text |
id | pubmed-8434224 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-84342242021-09-12 A–X⋯σ Interactions—Halogen Bonds with σ-Electrons as the Lewis Base Centre Grabowski, Sławomir J. Molecules Article CCSD(T)/aug-cc-pVTZ//ωB97XD/aug-cc-pVTZ calculations were performed for halogen-bonded complexes. Here, the molecular hydrogen, cyclopropane, cyclobutane and cyclopentane act as Lewis base units that interact through the electrons of the H–H or C–C σ-bond. The FCCH, ClCCH, BrCCH and ICCH species, as well as the F(2), Cl(2), Br(2) and I(2) molecular halogens, act as Lewis acid units in these complexes, interacting through the σ-hole localised at the halogen centre. The Quantum Theory of Atoms in Molecules (QTAIM), the Natural Bond Orbital (NBO) and the Energy Decomposition Analysis (EDA) approaches were applied to analyse these aforementioned complexes. These complexes may be classified as linked by A–X···σ halogen bonds, where A = C, X (halogen). However, distinct properties of these halogen bonds are observed that depend partly on the kind of electron donor: dihydrogen, cyclopropane, or another cycloalkane. Examples of similar interactions that occur in crystals are presented; Cambridge Structural Database (CSD) searches were carried out to find species linked by the A–X···σ halogen bonds. MDPI 2021-08-26 /pmc/articles/PMC8434224/ /pubmed/34500610 http://dx.doi.org/10.3390/molecules26175175 Text en © 2021 by the author. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Grabowski, Sławomir J. A–X⋯σ Interactions—Halogen Bonds with σ-Electrons as the Lewis Base Centre |
title | A–X⋯σ Interactions—Halogen Bonds with σ-Electrons as the Lewis Base Centre |
title_full | A–X⋯σ Interactions—Halogen Bonds with σ-Electrons as the Lewis Base Centre |
title_fullStr | A–X⋯σ Interactions—Halogen Bonds with σ-Electrons as the Lewis Base Centre |
title_full_unstemmed | A–X⋯σ Interactions—Halogen Bonds with σ-Electrons as the Lewis Base Centre |
title_short | A–X⋯σ Interactions—Halogen Bonds with σ-Electrons as the Lewis Base Centre |
title_sort | a–x⋯σ interactions—halogen bonds with σ-electrons as the lewis base centre |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8434224/ https://www.ncbi.nlm.nih.gov/pubmed/34500610 http://dx.doi.org/10.3390/molecules26175175 |
work_keys_str_mv | AT grabowskisławomirj axsinteractionshalogenbondswithselectronsasthelewisbasecentre |