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Identification and Experimental Validation of Immune-Associate lncRNAs for Predicting Prognosis in Cervical Cancer

PURPOSE: Cervical cancer (CC) is a major risk for health of modern women. Immune-related long non-coding RNAs (lncRNAs) can also serve as prognostic markers of overall survival (OS) in patients with CC. This study aimed to identify an immune-related lncRNA signature for the prospective assessment of...

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Autores principales: Ye, Jing, Chen, Xiaojing, Lu, Weiguo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Dove 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8435534/
https://www.ncbi.nlm.nih.gov/pubmed/34526775
http://dx.doi.org/10.2147/OTT.S322998
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author Ye, Jing
Chen, Xiaojing
Lu, Weiguo
author_facet Ye, Jing
Chen, Xiaojing
Lu, Weiguo
author_sort Ye, Jing
collection PubMed
description PURPOSE: Cervical cancer (CC) is a major risk for health of modern women. Immune-related long non-coding RNAs (lncRNAs) can also serve as prognostic markers of overall survival (OS) in patients with CC. This study aimed to identify an immune-related lncRNA signature for the prospective assessment of prognosis in CC patients. METHODS: We first calculated immune scores of CC patients in the Cancer Genome Atlas (TCGA) database. Univariate Cox, Lasso Cox and multivariate Cox regression analyses were perfumed to establish an immune-relative lncRNA signature. In addition, we processed pathway enrichment analysis and immune infiltration analysis between patients with higher or lower risk. Finally, T-cell Chemotaxis assays were processed to verify the function of 2 key lncRNAs. RESULTS: Our results suggested that patients with higher immune scores had longer survival time and some lncRNAs expressed differentially between two groups. Eight lncRNAs (LINC02802, LINC01877, RBAKDN, LINC02480, WWC2-AS2, LINC01281, ZBTB20-AS1, IFNG-AS1) were identified as prognostic signatures for CC. The immune-related lncRNA signature was correlated with disease progression and worse prognosis. Immune infiltration analysis indicated that the expression of 8-lncRNA signatures were corrected with infiltration level of immune cell subtypes. In addition, T-cell Chemotaxis assay validated that 2 key lncRNAs (ZBTB20-AS1 and LINC01281) could significantly promote the migration ability of T cells to CC cells. CONCLUSION: Our finding demonstrated the value of lncRNAs in evaluating the immune infiltrate of the tumor. The 8-lncRNA signature could predict the prognosis of CC and contribute to decisions regarding the immunotherapeutic strategy.
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spelling pubmed-84355342021-09-14 Identification and Experimental Validation of Immune-Associate lncRNAs for Predicting Prognosis in Cervical Cancer Ye, Jing Chen, Xiaojing Lu, Weiguo Onco Targets Ther Original Research PURPOSE: Cervical cancer (CC) is a major risk for health of modern women. Immune-related long non-coding RNAs (lncRNAs) can also serve as prognostic markers of overall survival (OS) in patients with CC. This study aimed to identify an immune-related lncRNA signature for the prospective assessment of prognosis in CC patients. METHODS: We first calculated immune scores of CC patients in the Cancer Genome Atlas (TCGA) database. Univariate Cox, Lasso Cox and multivariate Cox regression analyses were perfumed to establish an immune-relative lncRNA signature. In addition, we processed pathway enrichment analysis and immune infiltration analysis between patients with higher or lower risk. Finally, T-cell Chemotaxis assays were processed to verify the function of 2 key lncRNAs. RESULTS: Our results suggested that patients with higher immune scores had longer survival time and some lncRNAs expressed differentially between two groups. Eight lncRNAs (LINC02802, LINC01877, RBAKDN, LINC02480, WWC2-AS2, LINC01281, ZBTB20-AS1, IFNG-AS1) were identified as prognostic signatures for CC. The immune-related lncRNA signature was correlated with disease progression and worse prognosis. Immune infiltration analysis indicated that the expression of 8-lncRNA signatures were corrected with infiltration level of immune cell subtypes. In addition, T-cell Chemotaxis assay validated that 2 key lncRNAs (ZBTB20-AS1 and LINC01281) could significantly promote the migration ability of T cells to CC cells. CONCLUSION: Our finding demonstrated the value of lncRNAs in evaluating the immune infiltrate of the tumor. The 8-lncRNA signature could predict the prognosis of CC and contribute to decisions regarding the immunotherapeutic strategy. Dove 2021-09-07 /pmc/articles/PMC8435534/ /pubmed/34526775 http://dx.doi.org/10.2147/OTT.S322998 Text en © 2021 Ye et al. https://creativecommons.org/licenses/by-nc/3.0/This work is published and licensed by Dove Medical Press Limited. The full terms of this license are available at https://www.dovepress.com/terms.php and incorporate the Creative Commons Attribution – Non Commercial (unported, v3.0) License (http://creativecommons.org/licenses/by-nc/3.0/ (https://creativecommons.org/licenses/by-nc/3.0/) ). By accessing the work you hereby accept the Terms. Non-commercial uses of the work are permitted without any further permission from Dove Medical Press Limited, provided the work is properly attributed. For permission for commercial use of this work, please see paragraphs 4.2 and 5 of our Terms (https://www.dovepress.com/terms.php).
spellingShingle Original Research
Ye, Jing
Chen, Xiaojing
Lu, Weiguo
Identification and Experimental Validation of Immune-Associate lncRNAs for Predicting Prognosis in Cervical Cancer
title Identification and Experimental Validation of Immune-Associate lncRNAs for Predicting Prognosis in Cervical Cancer
title_full Identification and Experimental Validation of Immune-Associate lncRNAs for Predicting Prognosis in Cervical Cancer
title_fullStr Identification and Experimental Validation of Immune-Associate lncRNAs for Predicting Prognosis in Cervical Cancer
title_full_unstemmed Identification and Experimental Validation of Immune-Associate lncRNAs for Predicting Prognosis in Cervical Cancer
title_short Identification and Experimental Validation of Immune-Associate lncRNAs for Predicting Prognosis in Cervical Cancer
title_sort identification and experimental validation of immune-associate lncrnas for predicting prognosis in cervical cancer
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8435534/
https://www.ncbi.nlm.nih.gov/pubmed/34526775
http://dx.doi.org/10.2147/OTT.S322998
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