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Rapid CRISPR/Cas9 Editing of Genotype IX African Swine Fever Virus Circulating in Eastern and Central Africa

African swine fever virus (ASFV) is the etiological agent of a contagious and fatal disease of domestic pigs that has significant economic consequences for the global swine industry. Due to the lack of effective treatment and vaccines against African swine fever, there is an urgent need to leverage...

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Autores principales: Abkallo, Hussein M., Svitek, Nicholas, Oduor, Bernard, Awino, Elias, Henson, Sonal P., Oyola, Samuel O., Mwalimu, Stephen, Assad-Garcia, Nacrya, Fuchs, Walter, Vashee, Sanjay, Steinaa, Lucilla
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8435729/
https://www.ncbi.nlm.nih.gov/pubmed/34527025
http://dx.doi.org/10.3389/fgene.2021.733674
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author Abkallo, Hussein M.
Svitek, Nicholas
Oduor, Bernard
Awino, Elias
Henson, Sonal P.
Oyola, Samuel O.
Mwalimu, Stephen
Assad-Garcia, Nacrya
Fuchs, Walter
Vashee, Sanjay
Steinaa, Lucilla
author_facet Abkallo, Hussein M.
Svitek, Nicholas
Oduor, Bernard
Awino, Elias
Henson, Sonal P.
Oyola, Samuel O.
Mwalimu, Stephen
Assad-Garcia, Nacrya
Fuchs, Walter
Vashee, Sanjay
Steinaa, Lucilla
author_sort Abkallo, Hussein M.
collection PubMed
description African swine fever virus (ASFV) is the etiological agent of a contagious and fatal disease of domestic pigs that has significant economic consequences for the global swine industry. Due to the lack of effective treatment and vaccines against African swine fever, there is an urgent need to leverage cutting-edge technologies and cost-effective approaches for generating and purifying recombinant virus to fast-track the development of live-attenuated ASFV vaccines. Here, we describe the use of the CRISPR/Cas9 gene editing and a cost-effective cloning system to produce recombinant ASFVs. Combining these approaches, we developed a recombinant virus lacking the non-essential gene A238L (5EL) in the highly virulent genotype IX ASFV (ASFV-Kenya-IX-1033) genome in less than 2 months as opposed to the standard homologous recombination with conventional purification techniques which takes up to 6 months on average. Our approach could therefore be a method of choice for less resourced laboratories in developing nations.
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spelling pubmed-84357292021-09-14 Rapid CRISPR/Cas9 Editing of Genotype IX African Swine Fever Virus Circulating in Eastern and Central Africa Abkallo, Hussein M. Svitek, Nicholas Oduor, Bernard Awino, Elias Henson, Sonal P. Oyola, Samuel O. Mwalimu, Stephen Assad-Garcia, Nacrya Fuchs, Walter Vashee, Sanjay Steinaa, Lucilla Front Genet Genetics African swine fever virus (ASFV) is the etiological agent of a contagious and fatal disease of domestic pigs that has significant economic consequences for the global swine industry. Due to the lack of effective treatment and vaccines against African swine fever, there is an urgent need to leverage cutting-edge technologies and cost-effective approaches for generating and purifying recombinant virus to fast-track the development of live-attenuated ASFV vaccines. Here, we describe the use of the CRISPR/Cas9 gene editing and a cost-effective cloning system to produce recombinant ASFVs. Combining these approaches, we developed a recombinant virus lacking the non-essential gene A238L (5EL) in the highly virulent genotype IX ASFV (ASFV-Kenya-IX-1033) genome in less than 2 months as opposed to the standard homologous recombination with conventional purification techniques which takes up to 6 months on average. Our approach could therefore be a method of choice for less resourced laboratories in developing nations. Frontiers Media S.A. 2021-08-30 /pmc/articles/PMC8435729/ /pubmed/34527025 http://dx.doi.org/10.3389/fgene.2021.733674 Text en Copyright © 2021 Abkallo, Svitek, Oduor, Awino, Henson, Oyola, Mwalimu, Assad-Garcia, Fuchs, Vashee and Steinaa. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Genetics
Abkallo, Hussein M.
Svitek, Nicholas
Oduor, Bernard
Awino, Elias
Henson, Sonal P.
Oyola, Samuel O.
Mwalimu, Stephen
Assad-Garcia, Nacrya
Fuchs, Walter
Vashee, Sanjay
Steinaa, Lucilla
Rapid CRISPR/Cas9 Editing of Genotype IX African Swine Fever Virus Circulating in Eastern and Central Africa
title Rapid CRISPR/Cas9 Editing of Genotype IX African Swine Fever Virus Circulating in Eastern and Central Africa
title_full Rapid CRISPR/Cas9 Editing of Genotype IX African Swine Fever Virus Circulating in Eastern and Central Africa
title_fullStr Rapid CRISPR/Cas9 Editing of Genotype IX African Swine Fever Virus Circulating in Eastern and Central Africa
title_full_unstemmed Rapid CRISPR/Cas9 Editing of Genotype IX African Swine Fever Virus Circulating in Eastern and Central Africa
title_short Rapid CRISPR/Cas9 Editing of Genotype IX African Swine Fever Virus Circulating in Eastern and Central Africa
title_sort rapid crispr/cas9 editing of genotype ix african swine fever virus circulating in eastern and central africa
topic Genetics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8435729/
https://www.ncbi.nlm.nih.gov/pubmed/34527025
http://dx.doi.org/10.3389/fgene.2021.733674
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