Cargando…

Identification and Expression Analyses of Invertase Genes in Moso Bamboo Reveal Their Potential Drought Stress Functions

Invertases (INVs) can irreversibly hydrolyze sucrose into fructose and glucose, which play principal roles in carbon metabolism and responses to various stresses in plants. However, little is known about the INV family in bamboos, especially their potential function in drought stress. In this study,...

Descripción completa

Detalles Bibliográficos
Autores principales: Zhu, Chenglei, Yang, Kebin, Li, Guangzhu, Li, Ying, Gao, Zhimin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8435750/
https://www.ncbi.nlm.nih.gov/pubmed/34527019
http://dx.doi.org/10.3389/fgene.2021.696300
_version_ 1783751863787585536
author Zhu, Chenglei
Yang, Kebin
Li, Guangzhu
Li, Ying
Gao, Zhimin
author_facet Zhu, Chenglei
Yang, Kebin
Li, Guangzhu
Li, Ying
Gao, Zhimin
author_sort Zhu, Chenglei
collection PubMed
description Invertases (INVs) can irreversibly hydrolyze sucrose into fructose and glucose, which play principal roles in carbon metabolism and responses to various stresses in plants. However, little is known about the INV family in bamboos, especially their potential function in drought stress. In this study, 29 PeINVs were identified in moso bamboo (Phyllostachys edulis). They were clustered into alkaline/neutral invertase (NINV) and acid invertase (AINV) groups based on the gene structures, conserved motifs, and phylogenetic analysis results. The collinearity analysis showed nine segmental duplication pairs within PeINVs, and 25 pairs were detected between PeINVs and OsINVs. PeINVs may have undergone strong purification selection during evolution, and a variety of stress and phytohormone-related regulatory elements were found in the promoters of PeINVs. The tissue-specific expression analysis showed that PeINVs were differentially expressed in various moso bamboo tissues, which suggested that they showed functional diversity. Both the RNA-seq and quantitative real-time PCR results indicated that four PeINVs were significantly upregulated under drought stress. Co-expression network and Pearson’s correlation coefficient analyses showed that these PeINVs co-expressed positively with sugar and water transport genes (SWTGs), and the changes were consistent with sugar content. Overall, we speculate that the identified PeINVs are spatiotemporally expressed, which enables them to participate in moso bamboo growth and development. Furthermore, PeINVs, together with SWTGs, also seem to play vital roles in the response to drought stress. These results provide a comprehensive information resource for PeINVs, which will facilitate further study of the molecular mechanism underlying PeINVs involvement in the response to drought stress in moso bamboo.
format Online
Article
Text
id pubmed-8435750
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-84357502021-09-14 Identification and Expression Analyses of Invertase Genes in Moso Bamboo Reveal Their Potential Drought Stress Functions Zhu, Chenglei Yang, Kebin Li, Guangzhu Li, Ying Gao, Zhimin Front Genet Genetics Invertases (INVs) can irreversibly hydrolyze sucrose into fructose and glucose, which play principal roles in carbon metabolism and responses to various stresses in plants. However, little is known about the INV family in bamboos, especially their potential function in drought stress. In this study, 29 PeINVs were identified in moso bamboo (Phyllostachys edulis). They were clustered into alkaline/neutral invertase (NINV) and acid invertase (AINV) groups based on the gene structures, conserved motifs, and phylogenetic analysis results. The collinearity analysis showed nine segmental duplication pairs within PeINVs, and 25 pairs were detected between PeINVs and OsINVs. PeINVs may have undergone strong purification selection during evolution, and a variety of stress and phytohormone-related regulatory elements were found in the promoters of PeINVs. The tissue-specific expression analysis showed that PeINVs were differentially expressed in various moso bamboo tissues, which suggested that they showed functional diversity. Both the RNA-seq and quantitative real-time PCR results indicated that four PeINVs were significantly upregulated under drought stress. Co-expression network and Pearson’s correlation coefficient analyses showed that these PeINVs co-expressed positively with sugar and water transport genes (SWTGs), and the changes were consistent with sugar content. Overall, we speculate that the identified PeINVs are spatiotemporally expressed, which enables them to participate in moso bamboo growth and development. Furthermore, PeINVs, together with SWTGs, also seem to play vital roles in the response to drought stress. These results provide a comprehensive information resource for PeINVs, which will facilitate further study of the molecular mechanism underlying PeINVs involvement in the response to drought stress in moso bamboo. Frontiers Media S.A. 2021-08-30 /pmc/articles/PMC8435750/ /pubmed/34527019 http://dx.doi.org/10.3389/fgene.2021.696300 Text en Copyright © 2021 Zhu, Yang, Li, Li and Gao. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Genetics
Zhu, Chenglei
Yang, Kebin
Li, Guangzhu
Li, Ying
Gao, Zhimin
Identification and Expression Analyses of Invertase Genes in Moso Bamboo Reveal Their Potential Drought Stress Functions
title Identification and Expression Analyses of Invertase Genes in Moso Bamboo Reveal Their Potential Drought Stress Functions
title_full Identification and Expression Analyses of Invertase Genes in Moso Bamboo Reveal Their Potential Drought Stress Functions
title_fullStr Identification and Expression Analyses of Invertase Genes in Moso Bamboo Reveal Their Potential Drought Stress Functions
title_full_unstemmed Identification and Expression Analyses of Invertase Genes in Moso Bamboo Reveal Their Potential Drought Stress Functions
title_short Identification and Expression Analyses of Invertase Genes in Moso Bamboo Reveal Their Potential Drought Stress Functions
title_sort identification and expression analyses of invertase genes in moso bamboo reveal their potential drought stress functions
topic Genetics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8435750/
https://www.ncbi.nlm.nih.gov/pubmed/34527019
http://dx.doi.org/10.3389/fgene.2021.696300
work_keys_str_mv AT zhuchenglei identificationandexpressionanalysesofinvertasegenesinmosobamboorevealtheirpotentialdroughtstressfunctions
AT yangkebin identificationandexpressionanalysesofinvertasegenesinmosobamboorevealtheirpotentialdroughtstressfunctions
AT liguangzhu identificationandexpressionanalysesofinvertasegenesinmosobamboorevealtheirpotentialdroughtstressfunctions
AT liying identificationandexpressionanalysesofinvertasegenesinmosobamboorevealtheirpotentialdroughtstressfunctions
AT gaozhimin identificationandexpressionanalysesofinvertasegenesinmosobamboorevealtheirpotentialdroughtstressfunctions