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Clinical Significance and Integrative Analysis of the SMC Family in Hepatocellular Carcinoma
Worldwide, hepatocellular carcinoma (HCC) is one of the most malignant cancers with poor prognosis. The structural maintenance of chromosomes (SMC) gene family has been shown to play important roles in human cancers. Nevertheless, the role of SMC members in HCC is not well-understood. In this study,...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8437102/ https://www.ncbi.nlm.nih.gov/pubmed/34527684 http://dx.doi.org/10.3389/fmed.2021.727965 |
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author | Nie, Hui Wang, Yutong Yang, Xuejie Liao, Zhiming He, Xiaoyun Zhou, Jianhua Ou, Chunlin |
author_facet | Nie, Hui Wang, Yutong Yang, Xuejie Liao, Zhiming He, Xiaoyun Zhou, Jianhua Ou, Chunlin |
author_sort | Nie, Hui |
collection | PubMed |
description | Worldwide, hepatocellular carcinoma (HCC) is one of the most malignant cancers with poor prognosis. The structural maintenance of chromosomes (SMC) gene family has been shown to play important roles in human cancers. Nevertheless, the role of SMC members in HCC is not well-understood. In this study, we comprehensively explored the role of the SMC family in HCC using a series of bioinformatic analysis tools. Studies have demonstrated that the mRNA expression levels of SMC1A, SMC1B, SMC2, SMC4, and SMC6 are significantly overexpressed in HCC, and the protein levels of SMC1A, SMC2, SMC3, SMC4, SMC5, and SMC6 are similarly elevated. Moreover, HCC patients with high SMC2 and SMC4 expression levels exhibit poor survival. Using KEGG and GO analyses, we analyzed the enrichment of gene expression in the biological functions and pathways of the SMC family in HCC. Immune infiltration analysis revealed that the expression of the SMC family is closely associated with B cells, CD4+ T cells, CD8+ T cells, macrophages, neutrophils, and DCs. In conclusion, our findings will enhance a more thorough understanding of the SMC family in HCC progression and provide new directions for the diagnosis and treatment of HCC in the future. |
format | Online Article Text |
id | pubmed-8437102 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-84371022021-09-14 Clinical Significance and Integrative Analysis of the SMC Family in Hepatocellular Carcinoma Nie, Hui Wang, Yutong Yang, Xuejie Liao, Zhiming He, Xiaoyun Zhou, Jianhua Ou, Chunlin Front Med (Lausanne) Medicine Worldwide, hepatocellular carcinoma (HCC) is one of the most malignant cancers with poor prognosis. The structural maintenance of chromosomes (SMC) gene family has been shown to play important roles in human cancers. Nevertheless, the role of SMC members in HCC is not well-understood. In this study, we comprehensively explored the role of the SMC family in HCC using a series of bioinformatic analysis tools. Studies have demonstrated that the mRNA expression levels of SMC1A, SMC1B, SMC2, SMC4, and SMC6 are significantly overexpressed in HCC, and the protein levels of SMC1A, SMC2, SMC3, SMC4, SMC5, and SMC6 are similarly elevated. Moreover, HCC patients with high SMC2 and SMC4 expression levels exhibit poor survival. Using KEGG and GO analyses, we analyzed the enrichment of gene expression in the biological functions and pathways of the SMC family in HCC. Immune infiltration analysis revealed that the expression of the SMC family is closely associated with B cells, CD4+ T cells, CD8+ T cells, macrophages, neutrophils, and DCs. In conclusion, our findings will enhance a more thorough understanding of the SMC family in HCC progression and provide new directions for the diagnosis and treatment of HCC in the future. Frontiers Media S.A. 2021-08-30 /pmc/articles/PMC8437102/ /pubmed/34527684 http://dx.doi.org/10.3389/fmed.2021.727965 Text en Copyright © 2021 Nie, Wang, Yang, Liao, He, Zhou and Ou. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Medicine Nie, Hui Wang, Yutong Yang, Xuejie Liao, Zhiming He, Xiaoyun Zhou, Jianhua Ou, Chunlin Clinical Significance and Integrative Analysis of the SMC Family in Hepatocellular Carcinoma |
title | Clinical Significance and Integrative Analysis of the SMC Family in Hepatocellular Carcinoma |
title_full | Clinical Significance and Integrative Analysis of the SMC Family in Hepatocellular Carcinoma |
title_fullStr | Clinical Significance and Integrative Analysis of the SMC Family in Hepatocellular Carcinoma |
title_full_unstemmed | Clinical Significance and Integrative Analysis of the SMC Family in Hepatocellular Carcinoma |
title_short | Clinical Significance and Integrative Analysis of the SMC Family in Hepatocellular Carcinoma |
title_sort | clinical significance and integrative analysis of the smc family in hepatocellular carcinoma |
topic | Medicine |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8437102/ https://www.ncbi.nlm.nih.gov/pubmed/34527684 http://dx.doi.org/10.3389/fmed.2021.727965 |
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