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Evolution of the Insect PPK Gene Family
Insect pickpocket (PPK) receptors mediate diverse functions, among them the detection of mechano- and chemo-sensory stimuli. Notwithstanding their relevance, studies on their evolution only focused on Drosophila. We have analyzed the genomes of 26 species of eight orders including holometabolous and...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8438182/ https://www.ncbi.nlm.nih.gov/pubmed/34390578 http://dx.doi.org/10.1093/gbe/evab185 |
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author | Latorre-Estivalis, Jose Manuel Almeida, Francisca C Pontes, Gina Dopazo, Hernán Barrozo, Romina B Lorenzo, Marcelo Gustavo |
author_facet | Latorre-Estivalis, Jose Manuel Almeida, Francisca C Pontes, Gina Dopazo, Hernán Barrozo, Romina B Lorenzo, Marcelo Gustavo |
author_sort | Latorre-Estivalis, Jose Manuel |
collection | PubMed |
description | Insect pickpocket (PPK) receptors mediate diverse functions, among them the detection of mechano- and chemo-sensory stimuli. Notwithstanding their relevance, studies on their evolution only focused on Drosophila. We have analyzed the genomes of 26 species of eight orders including holometabolous and hemimetabolous insects (Blattodea, Orthoptera, Hemiptera, Phthiraptera, Hymenoptera, Lepidoptera, Coleoptera, and Diptera), to characterize the evolution of this gene family. PPKs were detected in all genomes analyzed, with 578 genes distributed in seven subfamilies. According to our phylogeny, ppk17 is the most divergent member, composing the new subfamily VII. PPKs evolved under a gene birth-and-death model that generated lineage-specific expansions usually located in clusters, while purifying selection affected several orthogroups. Subfamily V was the largest, including a mosquito-specific expansion that can be considered a new target for pest control. PPKs present a high gene turnover generating considerable variation. On one hand, Musca domestica (59), Aedes albopictus (51), Culex quinquefasciatus (48), and Blattella germanica (41) presented the largest PPK repertoires. On the other hand, Pediculus humanus (only ppk17), bees, and ants (6–9) had the smallest PPK sets. A subset of prevalent PPKs was identified, indicating very conserved functions for these receptors. Finally, at least 20% of the sequences presented calmodulin-binding motifs, suggesting that these PPKs may amplify sensory responses similarly as proposed for Drosophila melanogaster ppk25. Overall, this work characterized the evolutionary history of these receptors revealing relevant unknown gene sequence features and clade-specific expansions. |
format | Online Article Text |
id | pubmed-8438182 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-84381822021-09-15 Evolution of the Insect PPK Gene Family Latorre-Estivalis, Jose Manuel Almeida, Francisca C Pontes, Gina Dopazo, Hernán Barrozo, Romina B Lorenzo, Marcelo Gustavo Genome Biol Evol Research Article Insect pickpocket (PPK) receptors mediate diverse functions, among them the detection of mechano- and chemo-sensory stimuli. Notwithstanding their relevance, studies on their evolution only focused on Drosophila. We have analyzed the genomes of 26 species of eight orders including holometabolous and hemimetabolous insects (Blattodea, Orthoptera, Hemiptera, Phthiraptera, Hymenoptera, Lepidoptera, Coleoptera, and Diptera), to characterize the evolution of this gene family. PPKs were detected in all genomes analyzed, with 578 genes distributed in seven subfamilies. According to our phylogeny, ppk17 is the most divergent member, composing the new subfamily VII. PPKs evolved under a gene birth-and-death model that generated lineage-specific expansions usually located in clusters, while purifying selection affected several orthogroups. Subfamily V was the largest, including a mosquito-specific expansion that can be considered a new target for pest control. PPKs present a high gene turnover generating considerable variation. On one hand, Musca domestica (59), Aedes albopictus (51), Culex quinquefasciatus (48), and Blattella germanica (41) presented the largest PPK repertoires. On the other hand, Pediculus humanus (only ppk17), bees, and ants (6–9) had the smallest PPK sets. A subset of prevalent PPKs was identified, indicating very conserved functions for these receptors. Finally, at least 20% of the sequences presented calmodulin-binding motifs, suggesting that these PPKs may amplify sensory responses similarly as proposed for Drosophila melanogaster ppk25. Overall, this work characterized the evolutionary history of these receptors revealing relevant unknown gene sequence features and clade-specific expansions. Oxford University Press 2021-08-13 /pmc/articles/PMC8438182/ /pubmed/34390578 http://dx.doi.org/10.1093/gbe/evab185 Text en © The Author(s) 2021. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (https://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com |
spellingShingle | Research Article Latorre-Estivalis, Jose Manuel Almeida, Francisca C Pontes, Gina Dopazo, Hernán Barrozo, Romina B Lorenzo, Marcelo Gustavo Evolution of the Insect PPK Gene Family |
title | Evolution of the Insect PPK Gene Family |
title_full | Evolution of the Insect PPK Gene Family |
title_fullStr | Evolution of the Insect PPK Gene Family |
title_full_unstemmed | Evolution of the Insect PPK Gene Family |
title_short | Evolution of the Insect PPK Gene Family |
title_sort | evolution of the insect ppk gene family |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8438182/ https://www.ncbi.nlm.nih.gov/pubmed/34390578 http://dx.doi.org/10.1093/gbe/evab185 |
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