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The complete chloroplast genome sequence of Artocarpus gomezianus (Moraceae) from Xishuangbanna, China
Artocarpus gomezianus is a medicinal species native to Asia. To infer its phylogenetic relationship to the other Moraceae, the complete chloroplast genome of A. gomezianus was sequenced. The whole chloroplast genome is 160,743 bp in length, consisting of a pair of inverted repeat (IR) regions of 25,...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8439205/ https://www.ncbi.nlm.nih.gov/pubmed/34532580 http://dx.doi.org/10.1080/23802359.2021.1973603 |
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author | Lin, Xinggu Lin, Tao Zhixia, Sun Priyadi, Arief |
author_facet | Lin, Xinggu Lin, Tao Zhixia, Sun Priyadi, Arief |
author_sort | Lin, Xinggu |
collection | PubMed |
description | Artocarpus gomezianus is a medicinal species native to Asia. To infer its phylogenetic relationship to the other Moraceae, the complete chloroplast genome of A. gomezianus was sequenced. The whole chloroplast genome is 160,743 bp in length, consisting of a pair of inverted repeat (IR) regions of 25,691 bp, one large single-copy (LSC) region of 89,241 bp, and one small singlecopy (SSC) region of 20,120 bp. The overall GC content of the complete chloroplast genome is 35.81%. Maximum likelihood analysis using 11 complete plastomes of the Moraceae and Cannabis sativa (Cannabaceae) designated as the outgroup, resolved A. gomezianus in a clade with A. petelotii and A. hypargyreus. These phylogenetic results are not consistent with previous findings based on nuclear loci in which A. gomezianus was grouped as a sister to a clade containing A. petelotii and A. hypargyreus. The complete chloroplast genome of A. gomezianus will provide a powerful tool to accelerate pharmacological development, systematics, and future phylogenetic studies in the Moraceae. |
format | Online Article Text |
id | pubmed-8439205 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-84392052021-09-15 The complete chloroplast genome sequence of Artocarpus gomezianus (Moraceae) from Xishuangbanna, China Lin, Xinggu Lin, Tao Zhixia, Sun Priyadi, Arief Mitochondrial DNA B Resour Mitogenome Announcement Artocarpus gomezianus is a medicinal species native to Asia. To infer its phylogenetic relationship to the other Moraceae, the complete chloroplast genome of A. gomezianus was sequenced. The whole chloroplast genome is 160,743 bp in length, consisting of a pair of inverted repeat (IR) regions of 25,691 bp, one large single-copy (LSC) region of 89,241 bp, and one small singlecopy (SSC) region of 20,120 bp. The overall GC content of the complete chloroplast genome is 35.81%. Maximum likelihood analysis using 11 complete plastomes of the Moraceae and Cannabis sativa (Cannabaceae) designated as the outgroup, resolved A. gomezianus in a clade with A. petelotii and A. hypargyreus. These phylogenetic results are not consistent with previous findings based on nuclear loci in which A. gomezianus was grouped as a sister to a clade containing A. petelotii and A. hypargyreus. The complete chloroplast genome of A. gomezianus will provide a powerful tool to accelerate pharmacological development, systematics, and future phylogenetic studies in the Moraceae. Taylor & Francis 2021-09-09 /pmc/articles/PMC8439205/ /pubmed/34532580 http://dx.doi.org/10.1080/23802359.2021.1973603 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Lin, Xinggu Lin, Tao Zhixia, Sun Priyadi, Arief The complete chloroplast genome sequence of Artocarpus gomezianus (Moraceae) from Xishuangbanna, China |
title | The complete chloroplast genome sequence of Artocarpus gomezianus (Moraceae) from Xishuangbanna, China |
title_full | The complete chloroplast genome sequence of Artocarpus gomezianus (Moraceae) from Xishuangbanna, China |
title_fullStr | The complete chloroplast genome sequence of Artocarpus gomezianus (Moraceae) from Xishuangbanna, China |
title_full_unstemmed | The complete chloroplast genome sequence of Artocarpus gomezianus (Moraceae) from Xishuangbanna, China |
title_short | The complete chloroplast genome sequence of Artocarpus gomezianus (Moraceae) from Xishuangbanna, China |
title_sort | complete chloroplast genome sequence of artocarpus gomezianus (moraceae) from xishuangbanna, china |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8439205/ https://www.ncbi.nlm.nih.gov/pubmed/34532580 http://dx.doi.org/10.1080/23802359.2021.1973603 |
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