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The complete chloroplast genome sequence of Artocarpus gomezianus (Moraceae) from Xishuangbanna, China

Artocarpus gomezianus is a medicinal species native to Asia. To infer its phylogenetic relationship to the other Moraceae, the complete chloroplast genome of A. gomezianus was sequenced. The whole chloroplast genome is 160,743 bp in length, consisting of a pair of inverted repeat (IR) regions of 25,...

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Autores principales: Lin, Xinggu, Lin, Tao, Zhixia, Sun, Priyadi, Arief
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8439205/
https://www.ncbi.nlm.nih.gov/pubmed/34532580
http://dx.doi.org/10.1080/23802359.2021.1973603
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author Lin, Xinggu
Lin, Tao
Zhixia, Sun
Priyadi, Arief
author_facet Lin, Xinggu
Lin, Tao
Zhixia, Sun
Priyadi, Arief
author_sort Lin, Xinggu
collection PubMed
description Artocarpus gomezianus is a medicinal species native to Asia. To infer its phylogenetic relationship to the other Moraceae, the complete chloroplast genome of A. gomezianus was sequenced. The whole chloroplast genome is 160,743 bp in length, consisting of a pair of inverted repeat (IR) regions of 25,691 bp, one large single-copy (LSC) region of 89,241 bp, and one small singlecopy (SSC) region of 20,120 bp. The overall GC content of the complete chloroplast genome is 35.81%. Maximum likelihood analysis using 11 complete plastomes of the Moraceae and Cannabis sativa (Cannabaceae) designated as the outgroup, resolved A. gomezianus in a clade with A. petelotii and A. hypargyreus. These phylogenetic results are not consistent with previous findings based on nuclear loci in which A. gomezianus was grouped as a sister to a clade containing A. petelotii and A. hypargyreus. The complete chloroplast genome of A. gomezianus will provide a powerful tool to accelerate pharmacological development, systematics, and future phylogenetic studies in the Moraceae.
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spelling pubmed-84392052021-09-15 The complete chloroplast genome sequence of Artocarpus gomezianus (Moraceae) from Xishuangbanna, China Lin, Xinggu Lin, Tao Zhixia, Sun Priyadi, Arief Mitochondrial DNA B Resour Mitogenome Announcement Artocarpus gomezianus is a medicinal species native to Asia. To infer its phylogenetic relationship to the other Moraceae, the complete chloroplast genome of A. gomezianus was sequenced. The whole chloroplast genome is 160,743 bp in length, consisting of a pair of inverted repeat (IR) regions of 25,691 bp, one large single-copy (LSC) region of 89,241 bp, and one small singlecopy (SSC) region of 20,120 bp. The overall GC content of the complete chloroplast genome is 35.81%. Maximum likelihood analysis using 11 complete plastomes of the Moraceae and Cannabis sativa (Cannabaceae) designated as the outgroup, resolved A. gomezianus in a clade with A. petelotii and A. hypargyreus. These phylogenetic results are not consistent with previous findings based on nuclear loci in which A. gomezianus was grouped as a sister to a clade containing A. petelotii and A. hypargyreus. The complete chloroplast genome of A. gomezianus will provide a powerful tool to accelerate pharmacological development, systematics, and future phylogenetic studies in the Moraceae. Taylor & Francis 2021-09-09 /pmc/articles/PMC8439205/ /pubmed/34532580 http://dx.doi.org/10.1080/23802359.2021.1973603 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Lin, Xinggu
Lin, Tao
Zhixia, Sun
Priyadi, Arief
The complete chloroplast genome sequence of Artocarpus gomezianus (Moraceae) from Xishuangbanna, China
title The complete chloroplast genome sequence of Artocarpus gomezianus (Moraceae) from Xishuangbanna, China
title_full The complete chloroplast genome sequence of Artocarpus gomezianus (Moraceae) from Xishuangbanna, China
title_fullStr The complete chloroplast genome sequence of Artocarpus gomezianus (Moraceae) from Xishuangbanna, China
title_full_unstemmed The complete chloroplast genome sequence of Artocarpus gomezianus (Moraceae) from Xishuangbanna, China
title_short The complete chloroplast genome sequence of Artocarpus gomezianus (Moraceae) from Xishuangbanna, China
title_sort complete chloroplast genome sequence of artocarpus gomezianus (moraceae) from xishuangbanna, china
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8439205/
https://www.ncbi.nlm.nih.gov/pubmed/34532580
http://dx.doi.org/10.1080/23802359.2021.1973603
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