The complete chloroplast genome and phylogenetic analysis of Citrus clementina (Rutaceae)

Citrus, which is widely cultivated in tropical and subtropical climates, is one of the most important crops in the world. Here, we assembled and annotated the complete chloroplast genome of Citrus clementina (C. clementina) using Illumina sequencing data. This chloroplast genome exhibited a typical...

Descripción completa

Detalles Bibliográficos
Autores principales: Sun, Changlan, Lin, Haifeng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8439215/
https://www.ncbi.nlm.nih.gov/pubmed/34532587
http://dx.doi.org/10.1080/23802359.2021.1972860
_version_ 1783752492214910976
author Sun, Changlan
Lin, Haifeng
author_facet Sun, Changlan
Lin, Haifeng
author_sort Sun, Changlan
collection PubMed
description Citrus, which is widely cultivated in tropical and subtropical climates, is one of the most important crops in the world. Here, we assembled and annotated the complete chloroplast genome of Citrus clementina (C. clementina) using Illumina sequencing data. This chloroplast genome exhibited a typical quadripartite structure of 154,042 bp in length, and the overall GC content was 38.42%. A total of 134 genes (90 protein-coding genes, 36 tRNAs, and eight rRNAs) were predicted in this chloroplast genome. Phylogenetic analysis strongly supported that C. clementina was evolutionarily close to Citrus sunki.
format Online
Article
Text
id pubmed-8439215
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-84392152021-09-15 The complete chloroplast genome and phylogenetic analysis of Citrus clementina (Rutaceae) Sun, Changlan Lin, Haifeng Mitochondrial DNA B Resour Mitogenome Announcement Citrus, which is widely cultivated in tropical and subtropical climates, is one of the most important crops in the world. Here, we assembled and annotated the complete chloroplast genome of Citrus clementina (C. clementina) using Illumina sequencing data. This chloroplast genome exhibited a typical quadripartite structure of 154,042 bp in length, and the overall GC content was 38.42%. A total of 134 genes (90 protein-coding genes, 36 tRNAs, and eight rRNAs) were predicted in this chloroplast genome. Phylogenetic analysis strongly supported that C. clementina was evolutionarily close to Citrus sunki. Taylor & Francis 2021-09-13 /pmc/articles/PMC8439215/ /pubmed/34532587 http://dx.doi.org/10.1080/23802359.2021.1972860 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Sun, Changlan
Lin, Haifeng
The complete chloroplast genome and phylogenetic analysis of Citrus clementina (Rutaceae)
title The complete chloroplast genome and phylogenetic analysis of Citrus clementina (Rutaceae)
title_full The complete chloroplast genome and phylogenetic analysis of Citrus clementina (Rutaceae)
title_fullStr The complete chloroplast genome and phylogenetic analysis of Citrus clementina (Rutaceae)
title_full_unstemmed The complete chloroplast genome and phylogenetic analysis of Citrus clementina (Rutaceae)
title_short The complete chloroplast genome and phylogenetic analysis of Citrus clementina (Rutaceae)
title_sort complete chloroplast genome and phylogenetic analysis of citrus clementina (rutaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8439215/
https://www.ncbi.nlm.nih.gov/pubmed/34532587
http://dx.doi.org/10.1080/23802359.2021.1972860
work_keys_str_mv AT sunchanglan thecompletechloroplastgenomeandphylogeneticanalysisofcitrusclementinarutaceae
AT linhaifeng thecompletechloroplastgenomeandphylogeneticanalysisofcitrusclementinarutaceae
AT sunchanglan completechloroplastgenomeandphylogeneticanalysisofcitrusclementinarutaceae
AT linhaifeng completechloroplastgenomeandphylogeneticanalysisofcitrusclementinarutaceae

Ejemplares similares