Characterization of complete mitochondrial genome of rice flower carp Cyprinus carpio rubrofuscus (Cypriniformes: Cyprinidae)

Rice flower carp (Cyprinus carpio rubrofuscus) is a subspecies of Cyprinus carpio distributed in South China. In this study, we sequenced the mitochondrial genome of C. carpio rubrofuscus using Illumina HiSeq. The complete mitochondrial genome of C. carpio rubrofuscus was 16,582 bp in length, includ...

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Autores principales: Lin, Manfen, Li, Yao, Luo, Yuehong, Chen, Jinhui, Qin, Xiaoling
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8439227/
https://www.ncbi.nlm.nih.gov/pubmed/34532585
http://dx.doi.org/10.1080/23802359.2021.1970642
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author Lin, Manfen
Li, Yao
Luo, Yuehong
Chen, Jinhui
Qin, Xiaoling
author_facet Lin, Manfen
Li, Yao
Luo, Yuehong
Chen, Jinhui
Qin, Xiaoling
author_sort Lin, Manfen
collection PubMed
description Rice flower carp (Cyprinus carpio rubrofuscus) is a subspecies of Cyprinus carpio distributed in South China. In this study, we sequenced the mitochondrial genome of C. carpio rubrofuscus using Illumina HiSeq. The complete mitochondrial genome of C. carpio rubrofuscus was 16,582 bp in length, including 13 protein-coding genes, 22 transfer RNA genes, and two ribosomal RNA genes. The contents of the four bases in the mitochondrial DNA were A (31.89%), T (24.82%), C (27.53%), and G (15.76%). Phylogenetic analysis showed that C. carpio rubrofuscus was clustered with Cyprinus carpio and its varieties.
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spelling pubmed-84392272021-09-15 Characterization of complete mitochondrial genome of rice flower carp Cyprinus carpio rubrofuscus (Cypriniformes: Cyprinidae) Lin, Manfen Li, Yao Luo, Yuehong Chen, Jinhui Qin, Xiaoling Mitochondrial DNA B Resour Mitogenome Announcement Rice flower carp (Cyprinus carpio rubrofuscus) is a subspecies of Cyprinus carpio distributed in South China. In this study, we sequenced the mitochondrial genome of C. carpio rubrofuscus using Illumina HiSeq. The complete mitochondrial genome of C. carpio rubrofuscus was 16,582 bp in length, including 13 protein-coding genes, 22 transfer RNA genes, and two ribosomal RNA genes. The contents of the four bases in the mitochondrial DNA were A (31.89%), T (24.82%), C (27.53%), and G (15.76%). Phylogenetic analysis showed that C. carpio rubrofuscus was clustered with Cyprinus carpio and its varieties. Taylor & Francis 2021-09-13 /pmc/articles/PMC8439227/ /pubmed/34532585 http://dx.doi.org/10.1080/23802359.2021.1970642 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Lin, Manfen
Li, Yao
Luo, Yuehong
Chen, Jinhui
Qin, Xiaoling
Characterization of complete mitochondrial genome of rice flower carp Cyprinus carpio rubrofuscus (Cypriniformes: Cyprinidae)
title Characterization of complete mitochondrial genome of rice flower carp Cyprinus carpio rubrofuscus (Cypriniformes: Cyprinidae)
title_full Characterization of complete mitochondrial genome of rice flower carp Cyprinus carpio rubrofuscus (Cypriniformes: Cyprinidae)
title_fullStr Characterization of complete mitochondrial genome of rice flower carp Cyprinus carpio rubrofuscus (Cypriniformes: Cyprinidae)
title_full_unstemmed Characterization of complete mitochondrial genome of rice flower carp Cyprinus carpio rubrofuscus (Cypriniformes: Cyprinidae)
title_short Characterization of complete mitochondrial genome of rice flower carp Cyprinus carpio rubrofuscus (Cypriniformes: Cyprinidae)
title_sort characterization of complete mitochondrial genome of rice flower carp cyprinus carpio rubrofuscus (cypriniformes: cyprinidae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8439227/
https://www.ncbi.nlm.nih.gov/pubmed/34532585
http://dx.doi.org/10.1080/23802359.2021.1970642
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