The complete chloroplast genome sequence of the endemic and rare orchid Nothodoritis zhejiangensis (Orchidaceae) in China

Nothodoritis zhejiangensis (Orchidaceae) is a rare orchid unique to China of great horticultural value. The complete chloroplast (cp) genome of this species is 143,522 bp in length and the total GC content is 36.8%. It includes a large single copy (LSC) region of 83,830 bp in length, a small single...

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Autores principales: Yang, Lei, Wu, Qi, Yang, Mingqi, Zhang, Dong, Dong, Shubin, Cheng, Jin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8439232/
https://www.ncbi.nlm.nih.gov/pubmed/34532589
http://dx.doi.org/10.1080/23802359.2021.1972867
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author Yang, Lei
Wu, Qi
Yang, Mingqi
Zhang, Dong
Dong, Shubin
Cheng, Jin
author_facet Yang, Lei
Wu, Qi
Yang, Mingqi
Zhang, Dong
Dong, Shubin
Cheng, Jin
author_sort Yang, Lei
collection PubMed
description Nothodoritis zhejiangensis (Orchidaceae) is a rare orchid unique to China of great horticultural value. The complete chloroplast (cp) genome of this species is 143,522 bp in length and the total GC content is 36.8%. It includes a large single copy (LSC) region of 83,830 bp in length, a small single copy (SSC) region of 10,764 bp, and a pair of inverted repeat regions (IRs) with 24,464 bp. The cp genome contains 120 functional genes, including 74 protein-coding genes, 38 tRNA genes, and eight rRNA genes. The phylogenetic tree constructed by the maximum-likelihood method showed that the taxonomic status of N. zhejiangensis was clustered with the species in Phalaenopsis.
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spelling pubmed-84392322021-09-15 The complete chloroplast genome sequence of the endemic and rare orchid Nothodoritis zhejiangensis (Orchidaceae) in China Yang, Lei Wu, Qi Yang, Mingqi Zhang, Dong Dong, Shubin Cheng, Jin Mitochondrial DNA B Resour Mitogenome Announcement Nothodoritis zhejiangensis (Orchidaceae) is a rare orchid unique to China of great horticultural value. The complete chloroplast (cp) genome of this species is 143,522 bp in length and the total GC content is 36.8%. It includes a large single copy (LSC) region of 83,830 bp in length, a small single copy (SSC) region of 10,764 bp, and a pair of inverted repeat regions (IRs) with 24,464 bp. The cp genome contains 120 functional genes, including 74 protein-coding genes, 38 tRNA genes, and eight rRNA genes. The phylogenetic tree constructed by the maximum-likelihood method showed that the taxonomic status of N. zhejiangensis was clustered with the species in Phalaenopsis. Taylor & Francis 2021-09-13 /pmc/articles/PMC8439232/ /pubmed/34532589 http://dx.doi.org/10.1080/23802359.2021.1972867 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) ), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Yang, Lei
Wu, Qi
Yang, Mingqi
Zhang, Dong
Dong, Shubin
Cheng, Jin
The complete chloroplast genome sequence of the endemic and rare orchid Nothodoritis zhejiangensis (Orchidaceae) in China
title The complete chloroplast genome sequence of the endemic and rare orchid Nothodoritis zhejiangensis (Orchidaceae) in China
title_full The complete chloroplast genome sequence of the endemic and rare orchid Nothodoritis zhejiangensis (Orchidaceae) in China
title_fullStr The complete chloroplast genome sequence of the endemic and rare orchid Nothodoritis zhejiangensis (Orchidaceae) in China
title_full_unstemmed The complete chloroplast genome sequence of the endemic and rare orchid Nothodoritis zhejiangensis (Orchidaceae) in China
title_short The complete chloroplast genome sequence of the endemic and rare orchid Nothodoritis zhejiangensis (Orchidaceae) in China
title_sort complete chloroplast genome sequence of the endemic and rare orchid nothodoritis zhejiangensis (orchidaceae) in china
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8439232/
https://www.ncbi.nlm.nih.gov/pubmed/34532589
http://dx.doi.org/10.1080/23802359.2021.1972867
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