Complete chloroplast genome of Isoetes hypsophila (Isoetaceae), the Endangered quillwort in China

Isoetes hypsophila Hand.-Mazz. is an Endangered quillwort living in plateau wetlands in China. In the present study, the complete chloroplast genome of I. hypsophila was assembled. It is a circular form of 146,362 bp in length, comprising a pair of inverted repeat (IR) regions of 13,691 bp, a large...

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Detalles Bibliográficos
Autores principales: Gu, Yufeng, Yu, Junhao, Shang, Hui, Liu, Baodong, Yan, Yuehong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8439236/
https://www.ncbi.nlm.nih.gov/pubmed/34532584
http://dx.doi.org/10.1080/23802359.2021.1960216
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author Gu, Yufeng
Yu, Junhao
Shang, Hui
Liu, Baodong
Yan, Yuehong
author_facet Gu, Yufeng
Yu, Junhao
Shang, Hui
Liu, Baodong
Yan, Yuehong
author_sort Gu, Yufeng
collection PubMed
description Isoetes hypsophila Hand.-Mazz. is an Endangered quillwort living in plateau wetlands in China. In the present study, the complete chloroplast genome of I. hypsophila was assembled. It is a circular form of 146,362 bp in length, comprising a pair of inverted repeat (IR) regions of 13,691 bp, a large single copy (LSC) of 91,741 bp, and a small single copy (SSC) of 27,239 bp. After annotation, a total of 135 genes were predicted, which are 84 encode proteins 37 tRNA and 8 rRNA. The phylogenetic analysis indicated that I. hypsophila clustered with a clade of I. sinensis, I. taiwanensis and I. yunguiensis with strong support value. The chloroplast genome will contribute to further research and conservation of I. hypsophila.
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spelling pubmed-84392362021-09-15 Complete chloroplast genome of Isoetes hypsophila (Isoetaceae), the Endangered quillwort in China Gu, Yufeng Yu, Junhao Shang, Hui Liu, Baodong Yan, Yuehong Mitochondrial DNA B Resour Mitogenome Announcement Isoetes hypsophila Hand.-Mazz. is an Endangered quillwort living in plateau wetlands in China. In the present study, the complete chloroplast genome of I. hypsophila was assembled. It is a circular form of 146,362 bp in length, comprising a pair of inverted repeat (IR) regions of 13,691 bp, a large single copy (LSC) of 91,741 bp, and a small single copy (SSC) of 27,239 bp. After annotation, a total of 135 genes were predicted, which are 84 encode proteins 37 tRNA and 8 rRNA. The phylogenetic analysis indicated that I. hypsophila clustered with a clade of I. sinensis, I. taiwanensis and I. yunguiensis with strong support value. The chloroplast genome will contribute to further research and conservation of I. hypsophila. Taylor & Francis 2021-09-13 /pmc/articles/PMC8439236/ /pubmed/34532584 http://dx.doi.org/10.1080/23802359.2021.1960216 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Gu, Yufeng
Yu, Junhao
Shang, Hui
Liu, Baodong
Yan, Yuehong
Complete chloroplast genome of Isoetes hypsophila (Isoetaceae), the Endangered quillwort in China
title Complete chloroplast genome of Isoetes hypsophila (Isoetaceae), the Endangered quillwort in China
title_full Complete chloroplast genome of Isoetes hypsophila (Isoetaceae), the Endangered quillwort in China
title_fullStr Complete chloroplast genome of Isoetes hypsophila (Isoetaceae), the Endangered quillwort in China
title_full_unstemmed Complete chloroplast genome of Isoetes hypsophila (Isoetaceae), the Endangered quillwort in China
title_short Complete chloroplast genome of Isoetes hypsophila (Isoetaceae), the Endangered quillwort in China
title_sort complete chloroplast genome of isoetes hypsophila (isoetaceae), the endangered quillwort in china
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8439236/
https://www.ncbi.nlm.nih.gov/pubmed/34532584
http://dx.doi.org/10.1080/23802359.2021.1960216
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