Cargando…

Recent advances in SARS-CoV-2 Spike protein and RBD mutations comparison between new variants Alpha (B.1.1.7, United Kingdom), Beta (B.1.351, South Africa), Gamma (P.1, Brazil) and Delta (B.1.617.2, India)

New variants of SARS-CoV-2 Alpha (B.1.1.7); Beta (B.1.351) Gamma (P.1) and Delta (B.1.617.2) quickly spread in the UK, South Africa, Brazil and India, respectively. To address whether mutations in SARS-CoV-2 RBD spike protein could affect virus infectivity, peptides containing RBD amino acids mutati...

Descripción completa

Detalles Bibliográficos
Autores principales: Sanches, Paulo R.S., Charlie-Silva, Ives, Braz, Helyson L.B., Bittar, Cíntia, Freitas Calmon, Marilia, Rahal, Paula, Cilli, Eduardo M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8443533/
https://www.ncbi.nlm.nih.gov/pubmed/34548928
http://dx.doi.org/10.1016/j.jve.2021.100054
_version_ 1783753200911777792
author Sanches, Paulo R.S.
Charlie-Silva, Ives
Braz, Helyson L.B.
Bittar, Cíntia
Freitas Calmon, Marilia
Rahal, Paula
Cilli, Eduardo M.
author_facet Sanches, Paulo R.S.
Charlie-Silva, Ives
Braz, Helyson L.B.
Bittar, Cíntia
Freitas Calmon, Marilia
Rahal, Paula
Cilli, Eduardo M.
author_sort Sanches, Paulo R.S.
collection PubMed
description New variants of SARS-CoV-2 Alpha (B.1.1.7); Beta (B.1.351) Gamma (P.1) and Delta (B.1.617.2) quickly spread in the UK, South Africa, Brazil and India, respectively. To address whether mutations in SARS-CoV-2 RBD spike protein could affect virus infectivity, peptides containing RBD amino acids mutations have been constructed and interacted with human ACE2 by computational methods. Our results suggest that mutations in RBD amino acids K417, E484, L452, T478 and N501 are expressively increasing the affinity of this protein with human angiotensin-converting enzyme 2 (ACE2), consequently, variants Alpha (B.1.1.7), Beta (B1.351), Gamma (P.1) and Delta (B.1.617.2) could be more infective in human cells compared with SARS-CoV-2 isolated in Wuhan-2019 and the Gamma and Delta variants could be the most infective among them.
format Online
Article
Text
id pubmed-8443533
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Elsevier
record_format MEDLINE/PubMed
spelling pubmed-84435332021-09-16 Recent advances in SARS-CoV-2 Spike protein and RBD mutations comparison between new variants Alpha (B.1.1.7, United Kingdom), Beta (B.1.351, South Africa), Gamma (P.1, Brazil) and Delta (B.1.617.2, India) Sanches, Paulo R.S. Charlie-Silva, Ives Braz, Helyson L.B. Bittar, Cíntia Freitas Calmon, Marilia Rahal, Paula Cilli, Eduardo M. J Virus Erad Original research New variants of SARS-CoV-2 Alpha (B.1.1.7); Beta (B.1.351) Gamma (P.1) and Delta (B.1.617.2) quickly spread in the UK, South Africa, Brazil and India, respectively. To address whether mutations in SARS-CoV-2 RBD spike protein could affect virus infectivity, peptides containing RBD amino acids mutations have been constructed and interacted with human ACE2 by computational methods. Our results suggest that mutations in RBD amino acids K417, E484, L452, T478 and N501 are expressively increasing the affinity of this protein with human angiotensin-converting enzyme 2 (ACE2), consequently, variants Alpha (B.1.1.7), Beta (B1.351), Gamma (P.1) and Delta (B.1.617.2) could be more infective in human cells compared with SARS-CoV-2 isolated in Wuhan-2019 and the Gamma and Delta variants could be the most infective among them. Elsevier 2021-09-16 /pmc/articles/PMC8443533/ /pubmed/34548928 http://dx.doi.org/10.1016/j.jve.2021.100054 Text en © 2021 The Author(s) https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Original research
Sanches, Paulo R.S.
Charlie-Silva, Ives
Braz, Helyson L.B.
Bittar, Cíntia
Freitas Calmon, Marilia
Rahal, Paula
Cilli, Eduardo M.
Recent advances in SARS-CoV-2 Spike protein and RBD mutations comparison between new variants Alpha (B.1.1.7, United Kingdom), Beta (B.1.351, South Africa), Gamma (P.1, Brazil) and Delta (B.1.617.2, India)
title Recent advances in SARS-CoV-2 Spike protein and RBD mutations comparison between new variants Alpha (B.1.1.7, United Kingdom), Beta (B.1.351, South Africa), Gamma (P.1, Brazil) and Delta (B.1.617.2, India)
title_full Recent advances in SARS-CoV-2 Spike protein and RBD mutations comparison between new variants Alpha (B.1.1.7, United Kingdom), Beta (B.1.351, South Africa), Gamma (P.1, Brazil) and Delta (B.1.617.2, India)
title_fullStr Recent advances in SARS-CoV-2 Spike protein and RBD mutations comparison between new variants Alpha (B.1.1.7, United Kingdom), Beta (B.1.351, South Africa), Gamma (P.1, Brazil) and Delta (B.1.617.2, India)
title_full_unstemmed Recent advances in SARS-CoV-2 Spike protein and RBD mutations comparison between new variants Alpha (B.1.1.7, United Kingdom), Beta (B.1.351, South Africa), Gamma (P.1, Brazil) and Delta (B.1.617.2, India)
title_short Recent advances in SARS-CoV-2 Spike protein and RBD mutations comparison between new variants Alpha (B.1.1.7, United Kingdom), Beta (B.1.351, South Africa), Gamma (P.1, Brazil) and Delta (B.1.617.2, India)
title_sort recent advances in sars-cov-2 spike protein and rbd mutations comparison between new variants alpha (b.1.1.7, united kingdom), beta (b.1.351, south africa), gamma (p.1, brazil) and delta (b.1.617.2, india)
topic Original research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8443533/
https://www.ncbi.nlm.nih.gov/pubmed/34548928
http://dx.doi.org/10.1016/j.jve.2021.100054
work_keys_str_mv AT sanchespaulors recentadvancesinsarscov2spikeproteinandrbdmutationscomparisonbetweennewvariantsalphab117unitedkingdombetab1351southafricagammap1brazilanddeltab16172india
AT charliesilvaives recentadvancesinsarscov2spikeproteinandrbdmutationscomparisonbetweennewvariantsalphab117unitedkingdombetab1351southafricagammap1brazilanddeltab16172india
AT brazhelysonlb recentadvancesinsarscov2spikeproteinandrbdmutationscomparisonbetweennewvariantsalphab117unitedkingdombetab1351southafricagammap1brazilanddeltab16172india
AT bittarcintia recentadvancesinsarscov2spikeproteinandrbdmutationscomparisonbetweennewvariantsalphab117unitedkingdombetab1351southafricagammap1brazilanddeltab16172india
AT freitascalmonmarilia recentadvancesinsarscov2spikeproteinandrbdmutationscomparisonbetweennewvariantsalphab117unitedkingdombetab1351southafricagammap1brazilanddeltab16172india
AT rahalpaula recentadvancesinsarscov2spikeproteinandrbdmutationscomparisonbetweennewvariantsalphab117unitedkingdombetab1351southafricagammap1brazilanddeltab16172india
AT cillieduardom recentadvancesinsarscov2spikeproteinandrbdmutationscomparisonbetweennewvariantsalphab117unitedkingdombetab1351southafricagammap1brazilanddeltab16172india