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A multiscale agent-based model of ductal carcinoma in situ
OBJECTIVE: we present a multiscale agent-based model of Ductal Carcinoma in Situ (DCIS) in order to gain a detailed understanding of the cell-scale population dynamics, phenotypic distributions, and the associated interplay of important molecular signaling pathways that are involved in DCIS ductal i...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8445608/ https://www.ncbi.nlm.nih.gov/pubmed/31603768 http://dx.doi.org/10.1109/TBME.2019.2938485 |
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author | Butner, Joseph D. Fuentes, David Ozpolat, Bulent Calin, George A. Zhou, Xiaobo Lowengrub, John Cristini, Vittorio Wang, Zhihui |
author_facet | Butner, Joseph D. Fuentes, David Ozpolat, Bulent Calin, George A. Zhou, Xiaobo Lowengrub, John Cristini, Vittorio Wang, Zhihui |
author_sort | Butner, Joseph D. |
collection | PubMed |
description | OBJECTIVE: we present a multiscale agent-based model of Ductal Carcinoma in Situ (DCIS) in order to gain a detailed understanding of the cell-scale population dynamics, phenotypic distributions, and the associated interplay of important molecular signaling pathways that are involved in DCIS ductal invasion into the duct cavity (a process we refer to as duct advance rate here). METHODS: DCIS is modeled mathematically through a hybridized discrete cell-scale model and a continuum molecular scale model, which are explicitly linked through a bidirectional feedback mechanism. RESULTS: we find that duct advance rates occur in two distinct phases, characterized by an early exponential population expansion, followed by a long-term steady linear phase of population expansion, a result that is consistent with other modeling work. We further found that the rates were influenced most strongly by endocrine and paracrine signaling intensity, as well as by the effects of cell density induced quiescence within the DCIS population. CONCLUSION: our model analysis identified a complex interplay between phenotypic diversity that may provide a tumor adaptation mechanism to overcome proliferation limiting conditions, allowing for dynamic shifts in phenotypic populations in response to variation in molecular signaling intensity. Further, sensitivity analysis determined DCIS axial advance rates and calcification rates were most sensitive to cell cycle time variation. SIGNIFICANCE: this model may serve as a useful tool to study the cell-scale dynamics involved in DCIS initiation and intraductal invasion, and may provide insights into promising areas of future experimental research. |
format | Online Article Text |
id | pubmed-8445608 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
record_format | MEDLINE/PubMed |
spelling | pubmed-84456082021-09-16 A multiscale agent-based model of ductal carcinoma in situ Butner, Joseph D. Fuentes, David Ozpolat, Bulent Calin, George A. Zhou, Xiaobo Lowengrub, John Cristini, Vittorio Wang, Zhihui IEEE Trans Biomed Eng Article OBJECTIVE: we present a multiscale agent-based model of Ductal Carcinoma in Situ (DCIS) in order to gain a detailed understanding of the cell-scale population dynamics, phenotypic distributions, and the associated interplay of important molecular signaling pathways that are involved in DCIS ductal invasion into the duct cavity (a process we refer to as duct advance rate here). METHODS: DCIS is modeled mathematically through a hybridized discrete cell-scale model and a continuum molecular scale model, which are explicitly linked through a bidirectional feedback mechanism. RESULTS: we find that duct advance rates occur in two distinct phases, characterized by an early exponential population expansion, followed by a long-term steady linear phase of population expansion, a result that is consistent with other modeling work. We further found that the rates were influenced most strongly by endocrine and paracrine signaling intensity, as well as by the effects of cell density induced quiescence within the DCIS population. CONCLUSION: our model analysis identified a complex interplay between phenotypic diversity that may provide a tumor adaptation mechanism to overcome proliferation limiting conditions, allowing for dynamic shifts in phenotypic populations in response to variation in molecular signaling intensity. Further, sensitivity analysis determined DCIS axial advance rates and calcification rates were most sensitive to cell cycle time variation. SIGNIFICANCE: this model may serve as a useful tool to study the cell-scale dynamics involved in DCIS initiation and intraductal invasion, and may provide insights into promising areas of future experimental research. 2019-10-08 2020-05 /pmc/articles/PMC8445608/ /pubmed/31603768 http://dx.doi.org/10.1109/TBME.2019.2938485 Text en https://creativecommons.org/licenses/by/3.0/This work is licensed under a Creative Commons Attribution 3.0 License. For more information, see http://creativecommons.org/licenses/by/3.0/ (https://creativecommons.org/licenses/by/3.0/) |
spellingShingle | Article Butner, Joseph D. Fuentes, David Ozpolat, Bulent Calin, George A. Zhou, Xiaobo Lowengrub, John Cristini, Vittorio Wang, Zhihui A multiscale agent-based model of ductal carcinoma in situ |
title | A multiscale agent-based model of ductal carcinoma in situ |
title_full | A multiscale agent-based model of ductal carcinoma in situ |
title_fullStr | A multiscale agent-based model of ductal carcinoma in situ |
title_full_unstemmed | A multiscale agent-based model of ductal carcinoma in situ |
title_short | A multiscale agent-based model of ductal carcinoma in situ |
title_sort | multiscale agent-based model of ductal carcinoma in situ |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8445608/ https://www.ncbi.nlm.nih.gov/pubmed/31603768 http://dx.doi.org/10.1109/TBME.2019.2938485 |
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