Cargando…
A Robust Panel Based on Mitochondrial Localized Proteins for Prognostic Prediction of Lung Adenocarcinoma
Due to high energy and material metabolism requirements, mitochondria are frequently active in tumor cells. Our study found that the high energy metabolism status is positively correlated with the poor prognosis of patients with lung adenocarcinoma. We constructed a scoring system (mitoRiskscore) ba...
Autores principales: | , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8445726/ https://www.ncbi.nlm.nih.gov/pubmed/34539973 http://dx.doi.org/10.1155/2021/7569168 |
_version_ | 1784568711335641088 |
---|---|
author | Chen, Weifeng Wang, Jingyao Zhao, Qiumei Liu, Dandan Sun, Donglin Xie, Ningxia Zhang, Haohao Ye, Deji Li, Chaoyang Liu, Yongzhong Zhang, Xiaoren |
author_facet | Chen, Weifeng Wang, Jingyao Zhao, Qiumei Liu, Dandan Sun, Donglin Xie, Ningxia Zhang, Haohao Ye, Deji Li, Chaoyang Liu, Yongzhong Zhang, Xiaoren |
author_sort | Chen, Weifeng |
collection | PubMed |
description | Due to high energy and material metabolism requirements, mitochondria are frequently active in tumor cells. Our study found that the high energy metabolism status is positively correlated with the poor prognosis of patients with lung adenocarcinoma. We constructed a scoring system (mitoRiskscore) based on the gene expression of specific mitochondrial localized proteins through univariate and LASSO cox regression. It has been shown that high mitoRiskscore was correlated with a shorter survival time after surgery in patients with lung adenocarcinoma. Compared with the typical TNM grading system, the mitoRiskscore gene panel had higher prediction accuracy. A vast number of external verification results ensured its universality. Additionally, the mitoRiskscore could evaluate the metabolic pattern and chemotherapy sensitivity of the tumor samples. Lung adenocarcinoma with higher mitoRiskscore was more active in glycolysis, and oxidative phosphorylation expression of proliferation-related pathway genes was also significantly upregulated. In contrast, patients with low mitoRiskscore had similar metabolic patterns to normal tissues. In order to improve the accuracy of prediction ability and promote clinical usage, we developed a nomogram that combined mitoRiskscore and clinical prognostic factors to predict the 3-year, 5-year, and 10-year survival rates of patients. We also performed in vitro experiments to verify the function of the key genes in the mitoRiskscore panel. In conclusion, the mitoRiskscore scoring system may assist clinicians to judge the postoperative survival rate and chemotherapy of patients with lung adenocarcinoma. |
format | Online Article Text |
id | pubmed-8445726 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Hindawi |
record_format | MEDLINE/PubMed |
spelling | pubmed-84457262021-09-17 A Robust Panel Based on Mitochondrial Localized Proteins for Prognostic Prediction of Lung Adenocarcinoma Chen, Weifeng Wang, Jingyao Zhao, Qiumei Liu, Dandan Sun, Donglin Xie, Ningxia Zhang, Haohao Ye, Deji Li, Chaoyang Liu, Yongzhong Zhang, Xiaoren Oxid Med Cell Longev Research Article Due to high energy and material metabolism requirements, mitochondria are frequently active in tumor cells. Our study found that the high energy metabolism status is positively correlated with the poor prognosis of patients with lung adenocarcinoma. We constructed a scoring system (mitoRiskscore) based on the gene expression of specific mitochondrial localized proteins through univariate and LASSO cox regression. It has been shown that high mitoRiskscore was correlated with a shorter survival time after surgery in patients with lung adenocarcinoma. Compared with the typical TNM grading system, the mitoRiskscore gene panel had higher prediction accuracy. A vast number of external verification results ensured its universality. Additionally, the mitoRiskscore could evaluate the metabolic pattern and chemotherapy sensitivity of the tumor samples. Lung adenocarcinoma with higher mitoRiskscore was more active in glycolysis, and oxidative phosphorylation expression of proliferation-related pathway genes was also significantly upregulated. In contrast, patients with low mitoRiskscore had similar metabolic patterns to normal tissues. In order to improve the accuracy of prediction ability and promote clinical usage, we developed a nomogram that combined mitoRiskscore and clinical prognostic factors to predict the 3-year, 5-year, and 10-year survival rates of patients. We also performed in vitro experiments to verify the function of the key genes in the mitoRiskscore panel. In conclusion, the mitoRiskscore scoring system may assist clinicians to judge the postoperative survival rate and chemotherapy of patients with lung adenocarcinoma. Hindawi 2021-09-09 /pmc/articles/PMC8445726/ /pubmed/34539973 http://dx.doi.org/10.1155/2021/7569168 Text en Copyright © 2021 Weifeng Chen et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Chen, Weifeng Wang, Jingyao Zhao, Qiumei Liu, Dandan Sun, Donglin Xie, Ningxia Zhang, Haohao Ye, Deji Li, Chaoyang Liu, Yongzhong Zhang, Xiaoren A Robust Panel Based on Mitochondrial Localized Proteins for Prognostic Prediction of Lung Adenocarcinoma |
title | A Robust Panel Based on Mitochondrial Localized Proteins for Prognostic Prediction of Lung Adenocarcinoma |
title_full | A Robust Panel Based on Mitochondrial Localized Proteins for Prognostic Prediction of Lung Adenocarcinoma |
title_fullStr | A Robust Panel Based on Mitochondrial Localized Proteins for Prognostic Prediction of Lung Adenocarcinoma |
title_full_unstemmed | A Robust Panel Based on Mitochondrial Localized Proteins for Prognostic Prediction of Lung Adenocarcinoma |
title_short | A Robust Panel Based on Mitochondrial Localized Proteins for Prognostic Prediction of Lung Adenocarcinoma |
title_sort | robust panel based on mitochondrial localized proteins for prognostic prediction of lung adenocarcinoma |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8445726/ https://www.ncbi.nlm.nih.gov/pubmed/34539973 http://dx.doi.org/10.1155/2021/7569168 |
work_keys_str_mv | AT chenweifeng arobustpanelbasedonmitochondriallocalizedproteinsforprognosticpredictionoflungadenocarcinoma AT wangjingyao arobustpanelbasedonmitochondriallocalizedproteinsforprognosticpredictionoflungadenocarcinoma AT zhaoqiumei arobustpanelbasedonmitochondriallocalizedproteinsforprognosticpredictionoflungadenocarcinoma AT liudandan arobustpanelbasedonmitochondriallocalizedproteinsforprognosticpredictionoflungadenocarcinoma AT sundonglin arobustpanelbasedonmitochondriallocalizedproteinsforprognosticpredictionoflungadenocarcinoma AT xieningxia arobustpanelbasedonmitochondriallocalizedproteinsforprognosticpredictionoflungadenocarcinoma AT zhanghaohao arobustpanelbasedonmitochondriallocalizedproteinsforprognosticpredictionoflungadenocarcinoma AT yedeji arobustpanelbasedonmitochondriallocalizedproteinsforprognosticpredictionoflungadenocarcinoma AT lichaoyang arobustpanelbasedonmitochondriallocalizedproteinsforprognosticpredictionoflungadenocarcinoma AT liuyongzhong arobustpanelbasedonmitochondriallocalizedproteinsforprognosticpredictionoflungadenocarcinoma AT zhangxiaoren arobustpanelbasedonmitochondriallocalizedproteinsforprognosticpredictionoflungadenocarcinoma AT chenweifeng robustpanelbasedonmitochondriallocalizedproteinsforprognosticpredictionoflungadenocarcinoma AT wangjingyao robustpanelbasedonmitochondriallocalizedproteinsforprognosticpredictionoflungadenocarcinoma AT zhaoqiumei robustpanelbasedonmitochondriallocalizedproteinsforprognosticpredictionoflungadenocarcinoma AT liudandan robustpanelbasedonmitochondriallocalizedproteinsforprognosticpredictionoflungadenocarcinoma AT sundonglin robustpanelbasedonmitochondriallocalizedproteinsforprognosticpredictionoflungadenocarcinoma AT xieningxia robustpanelbasedonmitochondriallocalizedproteinsforprognosticpredictionoflungadenocarcinoma AT zhanghaohao robustpanelbasedonmitochondriallocalizedproteinsforprognosticpredictionoflungadenocarcinoma AT yedeji robustpanelbasedonmitochondriallocalizedproteinsforprognosticpredictionoflungadenocarcinoma AT lichaoyang robustpanelbasedonmitochondriallocalizedproteinsforprognosticpredictionoflungadenocarcinoma AT liuyongzhong robustpanelbasedonmitochondriallocalizedproteinsforprognosticpredictionoflungadenocarcinoma AT zhangxiaoren robustpanelbasedonmitochondriallocalizedproteinsforprognosticpredictionoflungadenocarcinoma |