Cargando…

Improving the estimation of alpine grassland fractional vegetation cover using optimized algorithms and multi-dimensional features

BACKGROUND: Fractional vegetation cover (FVC) is an important basic parameter for the quantitative monitoring of the alpine grassland ecosystem on the Qinghai-Tibetan Plateau. Based on unmanned aerial vehicle (UAV) acquisition of measured data and matching it with satellite remote sensing images at...

Descripción completa

Detalles Bibliográficos
Autores principales: Lin, Xingchen, Chen, Jianjun, Lou, Peiqing, Yi, Shuhua, Qin, Yu, You, Haotian, Han, Xiaowen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8447619/
https://www.ncbi.nlm.nih.gov/pubmed/34535179
http://dx.doi.org/10.1186/s13007-021-00796-5
_version_ 1784569055156371456
author Lin, Xingchen
Chen, Jianjun
Lou, Peiqing
Yi, Shuhua
Qin, Yu
You, Haotian
Han, Xiaowen
author_facet Lin, Xingchen
Chen, Jianjun
Lou, Peiqing
Yi, Shuhua
Qin, Yu
You, Haotian
Han, Xiaowen
author_sort Lin, Xingchen
collection PubMed
description BACKGROUND: Fractional vegetation cover (FVC) is an important basic parameter for the quantitative monitoring of the alpine grassland ecosystem on the Qinghai-Tibetan Plateau. Based on unmanned aerial vehicle (UAV) acquisition of measured data and matching it with satellite remote sensing images at the pixel scale, the proper selection of driving data and inversion algorithms can be determined and is crucial for generating high-precision alpine grassland FVC products. METHODS: This study presents estimations of alpine grassland FVC using optimized algorithms and multi-dimensional features. The multi-dimensional feature set (using original spectral bands, 22 vegetation indices, and topographical factors) was constructed from many sources of information, then the optimal feature subset was determined based on different feature selection algorithms as the driving data for optimized machine learning algorithms. Finally, the inversion accuracy, sensitivity to sample size, and computational efficiency of the four machine learning algorithms were evaluated. RESULTS: (1) The random forest (RF) algorithm (R(2): 0.861, RMSE: 9.5%) performed the best for FVC inversion among the four machine learning algorithms driven by the four typical vegetation indices. (2) Compared with the four typical vegetation indices, using multi-dimensional feature sets as driving data obviously improved the FVC inversion accuracy of the four machine learning algorithms (R(2) of the RF algorithm increased to 0.890). (3) Among the three variable selection algorithms (Boruta, sequential forward selection [SFS], and permutation importance-recursive feature elimination [PI-RFE]), the constructed PI-RFE feature selection algorithm had the best dimensionality reduction effect on the multi-dimensional feature set. (4) The hyper-parameter optimization of the machine learning algorithms and feature selection of the multi-dimensional feature set further improved FVC inversion accuracy (R(2): 0.917 and RMSE: 7.9% in the optimized RF algorithm). CONCLUSION: This study provides a highly precise, optimized algorithm with an optimal multi-dimensional feature set for FVC inversion, which is vital for the quantitative monitoring of the ecological environment of alpine grassland.
format Online
Article
Text
id pubmed-8447619
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher BioMed Central
record_format MEDLINE/PubMed
spelling pubmed-84476192021-09-17 Improving the estimation of alpine grassland fractional vegetation cover using optimized algorithms and multi-dimensional features Lin, Xingchen Chen, Jianjun Lou, Peiqing Yi, Shuhua Qin, Yu You, Haotian Han, Xiaowen Plant Methods Research BACKGROUND: Fractional vegetation cover (FVC) is an important basic parameter for the quantitative monitoring of the alpine grassland ecosystem on the Qinghai-Tibetan Plateau. Based on unmanned aerial vehicle (UAV) acquisition of measured data and matching it with satellite remote sensing images at the pixel scale, the proper selection of driving data and inversion algorithms can be determined and is crucial for generating high-precision alpine grassland FVC products. METHODS: This study presents estimations of alpine grassland FVC using optimized algorithms and multi-dimensional features. The multi-dimensional feature set (using original spectral bands, 22 vegetation indices, and topographical factors) was constructed from many sources of information, then the optimal feature subset was determined based on different feature selection algorithms as the driving data for optimized machine learning algorithms. Finally, the inversion accuracy, sensitivity to sample size, and computational efficiency of the four machine learning algorithms were evaluated. RESULTS: (1) The random forest (RF) algorithm (R(2): 0.861, RMSE: 9.5%) performed the best for FVC inversion among the four machine learning algorithms driven by the four typical vegetation indices. (2) Compared with the four typical vegetation indices, using multi-dimensional feature sets as driving data obviously improved the FVC inversion accuracy of the four machine learning algorithms (R(2) of the RF algorithm increased to 0.890). (3) Among the three variable selection algorithms (Boruta, sequential forward selection [SFS], and permutation importance-recursive feature elimination [PI-RFE]), the constructed PI-RFE feature selection algorithm had the best dimensionality reduction effect on the multi-dimensional feature set. (4) The hyper-parameter optimization of the machine learning algorithms and feature selection of the multi-dimensional feature set further improved FVC inversion accuracy (R(2): 0.917 and RMSE: 7.9% in the optimized RF algorithm). CONCLUSION: This study provides a highly precise, optimized algorithm with an optimal multi-dimensional feature set for FVC inversion, which is vital for the quantitative monitoring of the ecological environment of alpine grassland. BioMed Central 2021-09-17 /pmc/articles/PMC8447619/ /pubmed/34535179 http://dx.doi.org/10.1186/s13007-021-00796-5 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
Lin, Xingchen
Chen, Jianjun
Lou, Peiqing
Yi, Shuhua
Qin, Yu
You, Haotian
Han, Xiaowen
Improving the estimation of alpine grassland fractional vegetation cover using optimized algorithms and multi-dimensional features
title Improving the estimation of alpine grassland fractional vegetation cover using optimized algorithms and multi-dimensional features
title_full Improving the estimation of alpine grassland fractional vegetation cover using optimized algorithms and multi-dimensional features
title_fullStr Improving the estimation of alpine grassland fractional vegetation cover using optimized algorithms and multi-dimensional features
title_full_unstemmed Improving the estimation of alpine grassland fractional vegetation cover using optimized algorithms and multi-dimensional features
title_short Improving the estimation of alpine grassland fractional vegetation cover using optimized algorithms and multi-dimensional features
title_sort improving the estimation of alpine grassland fractional vegetation cover using optimized algorithms and multi-dimensional features
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8447619/
https://www.ncbi.nlm.nih.gov/pubmed/34535179
http://dx.doi.org/10.1186/s13007-021-00796-5
work_keys_str_mv AT linxingchen improvingtheestimationofalpinegrasslandfractionalvegetationcoverusingoptimizedalgorithmsandmultidimensionalfeatures
AT chenjianjun improvingtheestimationofalpinegrasslandfractionalvegetationcoverusingoptimizedalgorithmsandmultidimensionalfeatures
AT loupeiqing improvingtheestimationofalpinegrasslandfractionalvegetationcoverusingoptimizedalgorithmsandmultidimensionalfeatures
AT yishuhua improvingtheestimationofalpinegrasslandfractionalvegetationcoverusingoptimizedalgorithmsandmultidimensionalfeatures
AT qinyu improvingtheestimationofalpinegrasslandfractionalvegetationcoverusingoptimizedalgorithmsandmultidimensionalfeatures
AT youhaotian improvingtheestimationofalpinegrasslandfractionalvegetationcoverusingoptimizedalgorithmsandmultidimensionalfeatures
AT hanxiaowen improvingtheestimationofalpinegrasslandfractionalvegetationcoverusingoptimizedalgorithmsandmultidimensionalfeatures