Cargando…
Identification of Circular RNAs Related to Vascular Endothelial Proliferation, Migration, and Angiogenesis After Spinal Cord Injury Using Microarray Analysis in Female Mice
Background: Traumatic spinal cord injury (SCI) can result in severe disability and causes a considerable socio-economic burden worldwide. Circular RNAs (circRNAs) are important regulators of gene expression and pathological processes, and may represent therapeutic targets for SCI. To further evaluat...
Autores principales: | , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8447959/ https://www.ncbi.nlm.nih.gov/pubmed/34539543 http://dx.doi.org/10.3389/fneur.2021.666750 |
_version_ | 1784569130270064640 |
---|---|
author | Ye, Xin Chen, Yilei Wang, Jiasheng Chen, Jian Yao, Ying Wang, Lin-lin Zhao, Fengdong |
author_facet | Ye, Xin Chen, Yilei Wang, Jiasheng Chen, Jian Yao, Ying Wang, Lin-lin Zhao, Fengdong |
author_sort | Ye, Xin |
collection | PubMed |
description | Background: Traumatic spinal cord injury (SCI) can result in severe disability and causes a considerable socio-economic burden worldwide. Circular RNAs (circRNAs) are important regulators of gene expression and pathological processes, and may represent therapeutic targets for SCI. To further evaluate the role of circRNAs in SCI, we elucidated circRNA expression profiles related to vascular endothelial proliferation, migration, and angiogenesis during the early stages of secondary injury in a mouse model of SCI. Methods: Microarray analysis was performed to investigate the circRNA expression patterns in the spinal cord 3 days after SCI in female mice. Bioinformatic analyses, including GO enrichment analysis, KEGG pathway analysis, and circRNA-miRNA-mRNA network construction, were conducted to explore the role of circRNA dysregulation in vascular endothelial proliferation, migration, and angiogenesis following SCI. Results: The expression of 1,288 circRNAs was altered (>2-fold change, p < 0.05) in the spinal cord after SCI, consisting of 991 upregulated and 297 downregulated circRNAs. We constructed a circRNA-mRNA network to predict whether these circRNAs could act as “miRNA sponges.” We next assessed the association of altered circRNAs with vascular endothelial proliferation, migration, and angiogenesis using GO and KEGG analyses. Using this analysis, we found that a total of 121 circRNAs were correlated with vascular endothelial proliferation, migration, and angiogenesis in the spinal cord after SCI. Conclusions: Our study provides circRNA expression profiles during the early stages of SCI. circRNA.7079, circRNA.7078, and circRNA.6777 were found to play key roles in the vascular endothelial proliferation, migration, and angiogenesis, and may represent therapeutic targets for SCI. |
format | Online Article Text |
id | pubmed-8447959 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-84479592021-09-18 Identification of Circular RNAs Related to Vascular Endothelial Proliferation, Migration, and Angiogenesis After Spinal Cord Injury Using Microarray Analysis in Female Mice Ye, Xin Chen, Yilei Wang, Jiasheng Chen, Jian Yao, Ying Wang, Lin-lin Zhao, Fengdong Front Neurol Neurology Background: Traumatic spinal cord injury (SCI) can result in severe disability and causes a considerable socio-economic burden worldwide. Circular RNAs (circRNAs) are important regulators of gene expression and pathological processes, and may represent therapeutic targets for SCI. To further evaluate the role of circRNAs in SCI, we elucidated circRNA expression profiles related to vascular endothelial proliferation, migration, and angiogenesis during the early stages of secondary injury in a mouse model of SCI. Methods: Microarray analysis was performed to investigate the circRNA expression patterns in the spinal cord 3 days after SCI in female mice. Bioinformatic analyses, including GO enrichment analysis, KEGG pathway analysis, and circRNA-miRNA-mRNA network construction, were conducted to explore the role of circRNA dysregulation in vascular endothelial proliferation, migration, and angiogenesis following SCI. Results: The expression of 1,288 circRNAs was altered (>2-fold change, p < 0.05) in the spinal cord after SCI, consisting of 991 upregulated and 297 downregulated circRNAs. We constructed a circRNA-mRNA network to predict whether these circRNAs could act as “miRNA sponges.” We next assessed the association of altered circRNAs with vascular endothelial proliferation, migration, and angiogenesis using GO and KEGG analyses. Using this analysis, we found that a total of 121 circRNAs were correlated with vascular endothelial proliferation, migration, and angiogenesis in the spinal cord after SCI. Conclusions: Our study provides circRNA expression profiles during the early stages of SCI. circRNA.7079, circRNA.7078, and circRNA.6777 were found to play key roles in the vascular endothelial proliferation, migration, and angiogenesis, and may represent therapeutic targets for SCI. Frontiers Media S.A. 2021-09-03 /pmc/articles/PMC8447959/ /pubmed/34539543 http://dx.doi.org/10.3389/fneur.2021.666750 Text en Copyright © 2021 Ye, Chen, Wang, Chen, Yao, Wang and Zhao. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Neurology Ye, Xin Chen, Yilei Wang, Jiasheng Chen, Jian Yao, Ying Wang, Lin-lin Zhao, Fengdong Identification of Circular RNAs Related to Vascular Endothelial Proliferation, Migration, and Angiogenesis After Spinal Cord Injury Using Microarray Analysis in Female Mice |
title | Identification of Circular RNAs Related to Vascular Endothelial Proliferation, Migration, and Angiogenesis After Spinal Cord Injury Using Microarray Analysis in Female Mice |
title_full | Identification of Circular RNAs Related to Vascular Endothelial Proliferation, Migration, and Angiogenesis After Spinal Cord Injury Using Microarray Analysis in Female Mice |
title_fullStr | Identification of Circular RNAs Related to Vascular Endothelial Proliferation, Migration, and Angiogenesis After Spinal Cord Injury Using Microarray Analysis in Female Mice |
title_full_unstemmed | Identification of Circular RNAs Related to Vascular Endothelial Proliferation, Migration, and Angiogenesis After Spinal Cord Injury Using Microarray Analysis in Female Mice |
title_short | Identification of Circular RNAs Related to Vascular Endothelial Proliferation, Migration, and Angiogenesis After Spinal Cord Injury Using Microarray Analysis in Female Mice |
title_sort | identification of circular rnas related to vascular endothelial proliferation, migration, and angiogenesis after spinal cord injury using microarray analysis in female mice |
topic | Neurology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8447959/ https://www.ncbi.nlm.nih.gov/pubmed/34539543 http://dx.doi.org/10.3389/fneur.2021.666750 |
work_keys_str_mv | AT yexin identificationofcircularrnasrelatedtovascularendothelialproliferationmigrationandangiogenesisafterspinalcordinjuryusingmicroarrayanalysisinfemalemice AT chenyilei identificationofcircularrnasrelatedtovascularendothelialproliferationmigrationandangiogenesisafterspinalcordinjuryusingmicroarrayanalysisinfemalemice AT wangjiasheng identificationofcircularrnasrelatedtovascularendothelialproliferationmigrationandangiogenesisafterspinalcordinjuryusingmicroarrayanalysisinfemalemice AT chenjian identificationofcircularrnasrelatedtovascularendothelialproliferationmigrationandangiogenesisafterspinalcordinjuryusingmicroarrayanalysisinfemalemice AT yaoying identificationofcircularrnasrelatedtovascularendothelialproliferationmigrationandangiogenesisafterspinalcordinjuryusingmicroarrayanalysisinfemalemice AT wanglinlin identificationofcircularrnasrelatedtovascularendothelialproliferationmigrationandangiogenesisafterspinalcordinjuryusingmicroarrayanalysisinfemalemice AT zhaofengdong identificationofcircularrnasrelatedtovascularendothelialproliferationmigrationandangiogenesisafterspinalcordinjuryusingmicroarrayanalysisinfemalemice |