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Construction of a 5 immune-related lncRNA-based prognostic model of NSCLC via bioinformatics
Participate in tumorigenic, oncogenic, and tumor suppressive pathways through gene expression regulation. We aimed to build an immune-related long noncoding RNA (lncRNA) prognostic model to enhance nonsmall cell lung cancer (NSCLC) prognostic prediction. The original data were collected from the can...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Lippincott Williams & Wilkins
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8448051/ https://www.ncbi.nlm.nih.gov/pubmed/34664861 http://dx.doi.org/10.1097/MD.0000000000027222 |
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author | Huang, Ya-jie Huang, Chang-jie |
author_facet | Huang, Ya-jie Huang, Chang-jie |
author_sort | Huang, Ya-jie |
collection | PubMed |
description | Participate in tumorigenic, oncogenic, and tumor suppressive pathways through gene expression regulation. We aimed to build an immune-related long noncoding RNA (lncRNA) prognostic model to enhance nonsmall cell lung cancer (NSCLC) prognostic prediction. The original data were collected from the cancer genome atlas database. Perl and R software were used for statistical analysis. The effects of lncRNAs expression on prognosis were analyzed by Gene Expression Profiling Interactive Analysis. Silico functional analysis were performed by DAVID Bioinformatics Resources. The median risk score as a dividing value separated patients into high- and low-risk groups. These 2 groups had different 5-year survival rates, median survival times, and immune statuses. The 5-lncRNA signature was validated as an independent prognostic factor with high accuracy (area under the receiver operating characteristic = 0.722). Silico functional analysis connected the lncRNAs with immune-related biological processes and pathways in carcinogenesis. The novel immune-related lncRNA prognostic model had significant clinical implication for enhancing lung adenocarcinoma outcome prediction and guiding the choice of treatment. |
format | Online Article Text |
id | pubmed-8448051 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Lippincott Williams & Wilkins |
record_format | MEDLINE/PubMed |
spelling | pubmed-84480512021-09-20 Construction of a 5 immune-related lncRNA-based prognostic model of NSCLC via bioinformatics Huang, Ya-jie Huang, Chang-jie Medicine (Baltimore) 5700 Participate in tumorigenic, oncogenic, and tumor suppressive pathways through gene expression regulation. We aimed to build an immune-related long noncoding RNA (lncRNA) prognostic model to enhance nonsmall cell lung cancer (NSCLC) prognostic prediction. The original data were collected from the cancer genome atlas database. Perl and R software were used for statistical analysis. The effects of lncRNAs expression on prognosis were analyzed by Gene Expression Profiling Interactive Analysis. Silico functional analysis were performed by DAVID Bioinformatics Resources. The median risk score as a dividing value separated patients into high- and low-risk groups. These 2 groups had different 5-year survival rates, median survival times, and immune statuses. The 5-lncRNA signature was validated as an independent prognostic factor with high accuracy (area under the receiver operating characteristic = 0.722). Silico functional analysis connected the lncRNAs with immune-related biological processes and pathways in carcinogenesis. The novel immune-related lncRNA prognostic model had significant clinical implication for enhancing lung adenocarcinoma outcome prediction and guiding the choice of treatment. Lippincott Williams & Wilkins 2021-09-17 /pmc/articles/PMC8448051/ /pubmed/34664861 http://dx.doi.org/10.1097/MD.0000000000027222 Text en Copyright © 2021 the Author(s). Published by Wolters Kluwer Health, Inc. https://creativecommons.org/licenses/by-nc/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution-Non Commercial License 4.0 (CCBY-NC), where it is permissible to download, share, remix, transform, and buildup the work provided it is properly cited. The work cannot be used commercially without permission from the journal. http://creativecommons.org/licenses/by-nc/4.0 (https://creativecommons.org/licenses/by-nc/4.0/) |
spellingShingle | 5700 Huang, Ya-jie Huang, Chang-jie Construction of a 5 immune-related lncRNA-based prognostic model of NSCLC via bioinformatics |
title | Construction of a 5 immune-related lncRNA-based prognostic model of NSCLC via bioinformatics |
title_full | Construction of a 5 immune-related lncRNA-based prognostic model of NSCLC via bioinformatics |
title_fullStr | Construction of a 5 immune-related lncRNA-based prognostic model of NSCLC via bioinformatics |
title_full_unstemmed | Construction of a 5 immune-related lncRNA-based prognostic model of NSCLC via bioinformatics |
title_short | Construction of a 5 immune-related lncRNA-based prognostic model of NSCLC via bioinformatics |
title_sort | construction of a 5 immune-related lncrna-based prognostic model of nsclc via bioinformatics |
topic | 5700 |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8448051/ https://www.ncbi.nlm.nih.gov/pubmed/34664861 http://dx.doi.org/10.1097/MD.0000000000027222 |
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