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Construction of a 5 immune-related lncRNA-based prognostic model of NSCLC via bioinformatics

Participate in tumorigenic, oncogenic, and tumor suppressive pathways through gene expression regulation. We aimed to build an immune-related long noncoding RNA (lncRNA) prognostic model to enhance nonsmall cell lung cancer (NSCLC) prognostic prediction. The original data were collected from the can...

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Detalles Bibliográficos
Autores principales: Huang, Ya-jie, Huang, Chang-jie
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Lippincott Williams & Wilkins 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8448051/
https://www.ncbi.nlm.nih.gov/pubmed/34664861
http://dx.doi.org/10.1097/MD.0000000000027222
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author Huang, Ya-jie
Huang, Chang-jie
author_facet Huang, Ya-jie
Huang, Chang-jie
author_sort Huang, Ya-jie
collection PubMed
description Participate in tumorigenic, oncogenic, and tumor suppressive pathways through gene expression regulation. We aimed to build an immune-related long noncoding RNA (lncRNA) prognostic model to enhance nonsmall cell lung cancer (NSCLC) prognostic prediction. The original data were collected from the cancer genome atlas database. Perl and R software were used for statistical analysis. The effects of lncRNAs expression on prognosis were analyzed by Gene Expression Profiling Interactive Analysis. Silico functional analysis were performed by DAVID Bioinformatics Resources. The median risk score as a dividing value separated patients into high- and low-risk groups. These 2 groups had different 5-year survival rates, median survival times, and immune statuses. The 5-lncRNA signature was validated as an independent prognostic factor with high accuracy (area under the receiver operating characteristic = 0.722). Silico functional analysis connected the lncRNAs with immune-related biological processes and pathways in carcinogenesis. The novel immune-related lncRNA prognostic model had significant clinical implication for enhancing lung adenocarcinoma outcome prediction and guiding the choice of treatment.
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spelling pubmed-84480512021-09-20 Construction of a 5 immune-related lncRNA-based prognostic model of NSCLC via bioinformatics Huang, Ya-jie Huang, Chang-jie Medicine (Baltimore) 5700 Participate in tumorigenic, oncogenic, and tumor suppressive pathways through gene expression regulation. We aimed to build an immune-related long noncoding RNA (lncRNA) prognostic model to enhance nonsmall cell lung cancer (NSCLC) prognostic prediction. The original data were collected from the cancer genome atlas database. Perl and R software were used for statistical analysis. The effects of lncRNAs expression on prognosis were analyzed by Gene Expression Profiling Interactive Analysis. Silico functional analysis were performed by DAVID Bioinformatics Resources. The median risk score as a dividing value separated patients into high- and low-risk groups. These 2 groups had different 5-year survival rates, median survival times, and immune statuses. The 5-lncRNA signature was validated as an independent prognostic factor with high accuracy (area under the receiver operating characteristic = 0.722). Silico functional analysis connected the lncRNAs with immune-related biological processes and pathways in carcinogenesis. The novel immune-related lncRNA prognostic model had significant clinical implication for enhancing lung adenocarcinoma outcome prediction and guiding the choice of treatment. Lippincott Williams & Wilkins 2021-09-17 /pmc/articles/PMC8448051/ /pubmed/34664861 http://dx.doi.org/10.1097/MD.0000000000027222 Text en Copyright © 2021 the Author(s). Published by Wolters Kluwer Health, Inc. https://creativecommons.org/licenses/by-nc/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution-Non Commercial License 4.0 (CCBY-NC), where it is permissible to download, share, remix, transform, and buildup the work provided it is properly cited. The work cannot be used commercially without permission from the journal. http://creativecommons.org/licenses/by-nc/4.0 (https://creativecommons.org/licenses/by-nc/4.0/)
spellingShingle 5700
Huang, Ya-jie
Huang, Chang-jie
Construction of a 5 immune-related lncRNA-based prognostic model of NSCLC via bioinformatics
title Construction of a 5 immune-related lncRNA-based prognostic model of NSCLC via bioinformatics
title_full Construction of a 5 immune-related lncRNA-based prognostic model of NSCLC via bioinformatics
title_fullStr Construction of a 5 immune-related lncRNA-based prognostic model of NSCLC via bioinformatics
title_full_unstemmed Construction of a 5 immune-related lncRNA-based prognostic model of NSCLC via bioinformatics
title_short Construction of a 5 immune-related lncRNA-based prognostic model of NSCLC via bioinformatics
title_sort construction of a 5 immune-related lncrna-based prognostic model of nsclc via bioinformatics
topic 5700
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8448051/
https://www.ncbi.nlm.nih.gov/pubmed/34664861
http://dx.doi.org/10.1097/MD.0000000000027222
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