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Circulating tumor DNA is readily detectable among Ghanaian breast cancer patients supporting non-invasive cancer genomic studies in Africa

Circulating tumor DNA (ctDNA) sequencing studies could provide novel insights into the molecular pathology of cancer in sub-Saharan Africa. In 15 patient plasma samples collected at the time of diagnosis as part of the Ghana Breast Health Study and unselected for tumor grade and subtype, ctDNA was d...

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Autores principales: Ahuno, Samuel Terkper, Doebley, Anna-Lisa, Ahearn, Thomas U., Yarney, Joel, Titiloye, Nicholas, Hamel, Nancy, Adjei, Ernest, Clegg-Lamptey, Joe-Nat, Edusei, Lawrence, Awuah, Baffour, Song, Xiaoyu, Vanderpuye, Verna, Abubakar, Mustapha, Duggan, Maire, Stover, Daniel G., Nyarko, Kofi, Bartlett, John M. S., Aitpillah, Francis, Ansong, Daniel, Gardner, Kevin L., Boateng, Felix Andy, Bowcock, Anne M., Caldas, Carlos, Foulkes, William D., Wiafe, Seth, Wiafe-Addai, Beatrice, Garcia-Closas, Montserrat, Kwarteng, Alexander, Ha, Gavin, Figueroa, Jonine D., Polak, Paz
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8448727/
https://www.ncbi.nlm.nih.gov/pubmed/34535742
http://dx.doi.org/10.1038/s41698-021-00219-7
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author Ahuno, Samuel Terkper
Doebley, Anna-Lisa
Ahearn, Thomas U.
Yarney, Joel
Titiloye, Nicholas
Hamel, Nancy
Adjei, Ernest
Clegg-Lamptey, Joe-Nat
Edusei, Lawrence
Awuah, Baffour
Song, Xiaoyu
Vanderpuye, Verna
Abubakar, Mustapha
Duggan, Maire
Stover, Daniel G.
Nyarko, Kofi
Bartlett, John M. S.
Aitpillah, Francis
Ansong, Daniel
Gardner, Kevin L.
Boateng, Felix Andy
Bowcock, Anne M.
Caldas, Carlos
Foulkes, William D.
Wiafe, Seth
Wiafe-Addai, Beatrice
Garcia-Closas, Montserrat
Kwarteng, Alexander
Ha, Gavin
Figueroa, Jonine D.
Polak, Paz
author_facet Ahuno, Samuel Terkper
Doebley, Anna-Lisa
Ahearn, Thomas U.
Yarney, Joel
Titiloye, Nicholas
Hamel, Nancy
Adjei, Ernest
Clegg-Lamptey, Joe-Nat
Edusei, Lawrence
Awuah, Baffour
Song, Xiaoyu
Vanderpuye, Verna
Abubakar, Mustapha
Duggan, Maire
Stover, Daniel G.
Nyarko, Kofi
Bartlett, John M. S.
Aitpillah, Francis
Ansong, Daniel
Gardner, Kevin L.
Boateng, Felix Andy
Bowcock, Anne M.
Caldas, Carlos
Foulkes, William D.
Wiafe, Seth
Wiafe-Addai, Beatrice
Garcia-Closas, Montserrat
Kwarteng, Alexander
Ha, Gavin
Figueroa, Jonine D.
Polak, Paz
author_sort Ahuno, Samuel Terkper
collection PubMed
description Circulating tumor DNA (ctDNA) sequencing studies could provide novel insights into the molecular pathology of cancer in sub-Saharan Africa. In 15 patient plasma samples collected at the time of diagnosis as part of the Ghana Breast Health Study and unselected for tumor grade and subtype, ctDNA was detected in a majority of patients based on whole- genome sequencing at high (30×) and low (0.1×) depths. Breast cancer driver copy number alterations were observed in the majority of patients.
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spelling pubmed-84487272021-10-04 Circulating tumor DNA is readily detectable among Ghanaian breast cancer patients supporting non-invasive cancer genomic studies in Africa Ahuno, Samuel Terkper Doebley, Anna-Lisa Ahearn, Thomas U. Yarney, Joel Titiloye, Nicholas Hamel, Nancy Adjei, Ernest Clegg-Lamptey, Joe-Nat Edusei, Lawrence Awuah, Baffour Song, Xiaoyu Vanderpuye, Verna Abubakar, Mustapha Duggan, Maire Stover, Daniel G. Nyarko, Kofi Bartlett, John M. S. Aitpillah, Francis Ansong, Daniel Gardner, Kevin L. Boateng, Felix Andy Bowcock, Anne M. Caldas, Carlos Foulkes, William D. Wiafe, Seth Wiafe-Addai, Beatrice Garcia-Closas, Montserrat Kwarteng, Alexander Ha, Gavin Figueroa, Jonine D. Polak, Paz NPJ Precis Oncol Brief Communication Circulating tumor DNA (ctDNA) sequencing studies could provide novel insights into the molecular pathology of cancer in sub-Saharan Africa. In 15 patient plasma samples collected at the time of diagnosis as part of the Ghana Breast Health Study and unselected for tumor grade and subtype, ctDNA was detected in a majority of patients based on whole- genome sequencing at high (30×) and low (0.1×) depths. Breast cancer driver copy number alterations were observed in the majority of patients. Nature Publishing Group UK 2021-09-17 /pmc/articles/PMC8448727/ /pubmed/34535742 http://dx.doi.org/10.1038/s41698-021-00219-7 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Brief Communication
Ahuno, Samuel Terkper
Doebley, Anna-Lisa
Ahearn, Thomas U.
Yarney, Joel
Titiloye, Nicholas
Hamel, Nancy
Adjei, Ernest
Clegg-Lamptey, Joe-Nat
Edusei, Lawrence
Awuah, Baffour
Song, Xiaoyu
Vanderpuye, Verna
Abubakar, Mustapha
Duggan, Maire
Stover, Daniel G.
Nyarko, Kofi
Bartlett, John M. S.
Aitpillah, Francis
Ansong, Daniel
Gardner, Kevin L.
Boateng, Felix Andy
Bowcock, Anne M.
Caldas, Carlos
Foulkes, William D.
Wiafe, Seth
Wiafe-Addai, Beatrice
Garcia-Closas, Montserrat
Kwarteng, Alexander
Ha, Gavin
Figueroa, Jonine D.
Polak, Paz
Circulating tumor DNA is readily detectable among Ghanaian breast cancer patients supporting non-invasive cancer genomic studies in Africa
title Circulating tumor DNA is readily detectable among Ghanaian breast cancer patients supporting non-invasive cancer genomic studies in Africa
title_full Circulating tumor DNA is readily detectable among Ghanaian breast cancer patients supporting non-invasive cancer genomic studies in Africa
title_fullStr Circulating tumor DNA is readily detectable among Ghanaian breast cancer patients supporting non-invasive cancer genomic studies in Africa
title_full_unstemmed Circulating tumor DNA is readily detectable among Ghanaian breast cancer patients supporting non-invasive cancer genomic studies in Africa
title_short Circulating tumor DNA is readily detectable among Ghanaian breast cancer patients supporting non-invasive cancer genomic studies in Africa
title_sort circulating tumor dna is readily detectable among ghanaian breast cancer patients supporting non-invasive cancer genomic studies in africa
topic Brief Communication
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8448727/
https://www.ncbi.nlm.nih.gov/pubmed/34535742
http://dx.doi.org/10.1038/s41698-021-00219-7
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