Cargando…

Genomic and Phenotypic Characteristics for Vibrio vulnificus Infections

BACKGROUND: Vibrio vulnificus (VV) is a causative agent of foodborne diseases with high mortality. The aim of this study was to investigate the genomic and phenotypic profiles of VV. METHODS: Six VV isolates were collected and conducted whole-genome sequencing. Biofilm formation and anti-complement...

Descripción completa

Detalles Bibliográficos
Autores principales: Zhang, Jiajie, Huang, Yicheng, Xu, Hao, Ying, Shuaibing, Pan, Hongying, Yu, Wei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Dove 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8449862/
https://www.ncbi.nlm.nih.gov/pubmed/34548795
http://dx.doi.org/10.2147/IDR.S331468
_version_ 1784569501884350464
author Zhang, Jiajie
Huang, Yicheng
Xu, Hao
Ying, Shuaibing
Pan, Hongying
Yu, Wei
author_facet Zhang, Jiajie
Huang, Yicheng
Xu, Hao
Ying, Shuaibing
Pan, Hongying
Yu, Wei
author_sort Zhang, Jiajie
collection PubMed
description BACKGROUND: Vibrio vulnificus (VV) is a causative agent of foodborne diseases with high mortality. The aim of this study was to investigate the genomic and phenotypic profiles of VV. METHODS: Six VV isolates were collected and conducted whole-genome sequencing. Biofilm formation and anti-complement killing test were performed to evaluate the pathogenicity. Subsequently, 157 publicly available genomes of VV isolates were selected to determine the evolutionary relationship. RESULTS: The resistant genes norM and tet34 were identified in six isolates. A total of 156 virulence genes were identified. However, there is no obvious difference between strains isolated from blood and puncture fluid. The tendency of growth for six isolates decreased with the lapse of time, while the biofilm formation increased. The genes tadC and flp related to Flp pili were found in isolate 25506 and 30896, resulting in more obvious biofilm formation. In addition, the survival rate of 19656 was less than 20% due to lack of one genomic island including virulence genes (impD-H, clpV-1) relevant to type VI secretion system (T6SS). Multi-locus sequence typing (MLST) revealed 95 different STs and 19 novel STs, indicating that the tendency of 163 isolates was sporadic. Further comparative genomics analysis clearly classified 163 isolates into three distinct evolutionary lineages. CONCLUSION: VV infections were sporadic in humans and the environment. Virulence genes impD-H and clpV-1 related to T6SS were associated with pathogenicity phenotype of VV.
format Online
Article
Text
id pubmed-8449862
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Dove
record_format MEDLINE/PubMed
spelling pubmed-84498622021-09-20 Genomic and Phenotypic Characteristics for Vibrio vulnificus Infections Zhang, Jiajie Huang, Yicheng Xu, Hao Ying, Shuaibing Pan, Hongying Yu, Wei Infect Drug Resist Original Research BACKGROUND: Vibrio vulnificus (VV) is a causative agent of foodborne diseases with high mortality. The aim of this study was to investigate the genomic and phenotypic profiles of VV. METHODS: Six VV isolates were collected and conducted whole-genome sequencing. Biofilm formation and anti-complement killing test were performed to evaluate the pathogenicity. Subsequently, 157 publicly available genomes of VV isolates were selected to determine the evolutionary relationship. RESULTS: The resistant genes norM and tet34 were identified in six isolates. A total of 156 virulence genes were identified. However, there is no obvious difference between strains isolated from blood and puncture fluid. The tendency of growth for six isolates decreased with the lapse of time, while the biofilm formation increased. The genes tadC and flp related to Flp pili were found in isolate 25506 and 30896, resulting in more obvious biofilm formation. In addition, the survival rate of 19656 was less than 20% due to lack of one genomic island including virulence genes (impD-H, clpV-1) relevant to type VI secretion system (T6SS). Multi-locus sequence typing (MLST) revealed 95 different STs and 19 novel STs, indicating that the tendency of 163 isolates was sporadic. Further comparative genomics analysis clearly classified 163 isolates into three distinct evolutionary lineages. CONCLUSION: VV infections were sporadic in humans and the environment. Virulence genes impD-H and clpV-1 related to T6SS were associated with pathogenicity phenotype of VV. Dove 2021-09-14 /pmc/articles/PMC8449862/ /pubmed/34548795 http://dx.doi.org/10.2147/IDR.S331468 Text en © 2021 Zhang et al. https://creativecommons.org/licenses/by-nc/3.0/This work is published and licensed by Dove Medical Press Limited. The full terms of this license are available at https://www.dovepress.com/terms.php and incorporate the Creative Commons Attribution – Non Commercial (unported, v3.0) License (http://creativecommons.org/licenses/by-nc/3.0/ (https://creativecommons.org/licenses/by-nc/3.0/) ). By accessing the work you hereby accept the Terms. Non-commercial uses of the work are permitted without any further permission from Dove Medical Press Limited, provided the work is properly attributed. For permission for commercial use of this work, please see paragraphs 4.2 and 5 of our Terms (https://www.dovepress.com/terms.php).
spellingShingle Original Research
Zhang, Jiajie
Huang, Yicheng
Xu, Hao
Ying, Shuaibing
Pan, Hongying
Yu, Wei
Genomic and Phenotypic Characteristics for Vibrio vulnificus Infections
title Genomic and Phenotypic Characteristics for Vibrio vulnificus Infections
title_full Genomic and Phenotypic Characteristics for Vibrio vulnificus Infections
title_fullStr Genomic and Phenotypic Characteristics for Vibrio vulnificus Infections
title_full_unstemmed Genomic and Phenotypic Characteristics for Vibrio vulnificus Infections
title_short Genomic and Phenotypic Characteristics for Vibrio vulnificus Infections
title_sort genomic and phenotypic characteristics for vibrio vulnificus infections
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8449862/
https://www.ncbi.nlm.nih.gov/pubmed/34548795
http://dx.doi.org/10.2147/IDR.S331468
work_keys_str_mv AT zhangjiajie genomicandphenotypiccharacteristicsforvibriovulnificusinfections
AT huangyicheng genomicandphenotypiccharacteristicsforvibriovulnificusinfections
AT xuhao genomicandphenotypiccharacteristicsforvibriovulnificusinfections
AT yingshuaibing genomicandphenotypiccharacteristicsforvibriovulnificusinfections
AT panhongying genomicandphenotypiccharacteristicsforvibriovulnificusinfections
AT yuwei genomicandphenotypiccharacteristicsforvibriovulnificusinfections