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Genomic and Phenotypic Characteristics for Vibrio vulnificus Infections
BACKGROUND: Vibrio vulnificus (VV) is a causative agent of foodborne diseases with high mortality. The aim of this study was to investigate the genomic and phenotypic profiles of VV. METHODS: Six VV isolates were collected and conducted whole-genome sequencing. Biofilm formation and anti-complement...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Dove
2021
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8449862/ https://www.ncbi.nlm.nih.gov/pubmed/34548795 http://dx.doi.org/10.2147/IDR.S331468 |
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author | Zhang, Jiajie Huang, Yicheng Xu, Hao Ying, Shuaibing Pan, Hongying Yu, Wei |
author_facet | Zhang, Jiajie Huang, Yicheng Xu, Hao Ying, Shuaibing Pan, Hongying Yu, Wei |
author_sort | Zhang, Jiajie |
collection | PubMed |
description | BACKGROUND: Vibrio vulnificus (VV) is a causative agent of foodborne diseases with high mortality. The aim of this study was to investigate the genomic and phenotypic profiles of VV. METHODS: Six VV isolates were collected and conducted whole-genome sequencing. Biofilm formation and anti-complement killing test were performed to evaluate the pathogenicity. Subsequently, 157 publicly available genomes of VV isolates were selected to determine the evolutionary relationship. RESULTS: The resistant genes norM and tet34 were identified in six isolates. A total of 156 virulence genes were identified. However, there is no obvious difference between strains isolated from blood and puncture fluid. The tendency of growth for six isolates decreased with the lapse of time, while the biofilm formation increased. The genes tadC and flp related to Flp pili were found in isolate 25506 and 30896, resulting in more obvious biofilm formation. In addition, the survival rate of 19656 was less than 20% due to lack of one genomic island including virulence genes (impD-H, clpV-1) relevant to type VI secretion system (T6SS). Multi-locus sequence typing (MLST) revealed 95 different STs and 19 novel STs, indicating that the tendency of 163 isolates was sporadic. Further comparative genomics analysis clearly classified 163 isolates into three distinct evolutionary lineages. CONCLUSION: VV infections were sporadic in humans and the environment. Virulence genes impD-H and clpV-1 related to T6SS were associated with pathogenicity phenotype of VV. |
format | Online Article Text |
id | pubmed-8449862 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Dove |
record_format | MEDLINE/PubMed |
spelling | pubmed-84498622021-09-20 Genomic and Phenotypic Characteristics for Vibrio vulnificus Infections Zhang, Jiajie Huang, Yicheng Xu, Hao Ying, Shuaibing Pan, Hongying Yu, Wei Infect Drug Resist Original Research BACKGROUND: Vibrio vulnificus (VV) is a causative agent of foodborne diseases with high mortality. The aim of this study was to investigate the genomic and phenotypic profiles of VV. METHODS: Six VV isolates were collected and conducted whole-genome sequencing. Biofilm formation and anti-complement killing test were performed to evaluate the pathogenicity. Subsequently, 157 publicly available genomes of VV isolates were selected to determine the evolutionary relationship. RESULTS: The resistant genes norM and tet34 were identified in six isolates. A total of 156 virulence genes were identified. However, there is no obvious difference between strains isolated from blood and puncture fluid. The tendency of growth for six isolates decreased with the lapse of time, while the biofilm formation increased. The genes tadC and flp related to Flp pili were found in isolate 25506 and 30896, resulting in more obvious biofilm formation. In addition, the survival rate of 19656 was less than 20% due to lack of one genomic island including virulence genes (impD-H, clpV-1) relevant to type VI secretion system (T6SS). Multi-locus sequence typing (MLST) revealed 95 different STs and 19 novel STs, indicating that the tendency of 163 isolates was sporadic. Further comparative genomics analysis clearly classified 163 isolates into three distinct evolutionary lineages. CONCLUSION: VV infections were sporadic in humans and the environment. Virulence genes impD-H and clpV-1 related to T6SS were associated with pathogenicity phenotype of VV. Dove 2021-09-14 /pmc/articles/PMC8449862/ /pubmed/34548795 http://dx.doi.org/10.2147/IDR.S331468 Text en © 2021 Zhang et al. https://creativecommons.org/licenses/by-nc/3.0/This work is published and licensed by Dove Medical Press Limited. The full terms of this license are available at https://www.dovepress.com/terms.php and incorporate the Creative Commons Attribution – Non Commercial (unported, v3.0) License (http://creativecommons.org/licenses/by-nc/3.0/ (https://creativecommons.org/licenses/by-nc/3.0/) ). By accessing the work you hereby accept the Terms. Non-commercial uses of the work are permitted without any further permission from Dove Medical Press Limited, provided the work is properly attributed. For permission for commercial use of this work, please see paragraphs 4.2 and 5 of our Terms (https://www.dovepress.com/terms.php). |
spellingShingle | Original Research Zhang, Jiajie Huang, Yicheng Xu, Hao Ying, Shuaibing Pan, Hongying Yu, Wei Genomic and Phenotypic Characteristics for Vibrio vulnificus Infections |
title | Genomic and Phenotypic Characteristics for Vibrio vulnificus Infections |
title_full | Genomic and Phenotypic Characteristics for Vibrio vulnificus Infections |
title_fullStr | Genomic and Phenotypic Characteristics for Vibrio vulnificus Infections |
title_full_unstemmed | Genomic and Phenotypic Characteristics for Vibrio vulnificus Infections |
title_short | Genomic and Phenotypic Characteristics for Vibrio vulnificus Infections |
title_sort | genomic and phenotypic characteristics for vibrio vulnificus infections |
topic | Original Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8449862/ https://www.ncbi.nlm.nih.gov/pubmed/34548795 http://dx.doi.org/10.2147/IDR.S331468 |
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