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Molecular docking analysis of flupenthixol and desmethylastemizole with the apoptotic regulator proteins CFLAR and TRAF2 linked to lung carcinoma

It is known that molecular changes in apoptotic genes due to mutation may cause disruption of apoptotic pathway resulting in an abrupt increase in cell proliferation. Therefore, it is of interest to identify compounds that could potentially replenish the changes in the apoptotic pathway, resulted fr...

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Autores principales: Das, Subrata, Talukdar, Anupam Das, Nath, Rajat, Nath, Deepa, Rahaman, Ashikur, Bhattacharjee, Shamee, Choudhury, Manbendra Dutta
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Biomedical Informatics 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8450155/
https://www.ncbi.nlm.nih.gov/pubmed/34602774
http://dx.doi.org/10.6026/97320630017470
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author Das, Subrata
Talukdar, Anupam Das
Nath, Rajat
Nath, Deepa
Rahaman, Ashikur
Bhattacharjee, Shamee
Choudhury, Manbendra Dutta
author_facet Das, Subrata
Talukdar, Anupam Das
Nath, Rajat
Nath, Deepa
Rahaman, Ashikur
Bhattacharjee, Shamee
Choudhury, Manbendra Dutta
author_sort Das, Subrata
collection PubMed
description It is known that molecular changes in apoptotic genes due to mutation may cause disruption of apoptotic pathway resulting in an abrupt increase in cell proliferation. Therefore, it is of interest to identify compounds that could potentially replenish the changes in the apoptotic pathway, resulted from mutation. The gene network analysis using the Network Analyzer Plugin of Cytoscape (3.5.1) shows CFLAR and TRAF2 as influential genes in the apoptotic pathway. Mutation in these genes brings loss in apoptotic property of a cell and thus increases the cell proliferating activity. Thus, data on the molecular docking analysis of four natural compounds from Ottelia alismoides (L.) Pers with the two target proteins were reported. Flupenthixol and desmethylastemizole was found to be two efficient ligand molecules based on ligand-target interaction. In stereochemical quality assessment, the Ramachandran plot analysis of receptors indicates the better stereochemical characteristics for receptor-ligand interaction.
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spelling pubmed-84501552021-10-01 Molecular docking analysis of flupenthixol and desmethylastemizole with the apoptotic regulator proteins CFLAR and TRAF2 linked to lung carcinoma Das, Subrata Talukdar, Anupam Das Nath, Rajat Nath, Deepa Rahaman, Ashikur Bhattacharjee, Shamee Choudhury, Manbendra Dutta Bioinformation Research Article It is known that molecular changes in apoptotic genes due to mutation may cause disruption of apoptotic pathway resulting in an abrupt increase in cell proliferation. Therefore, it is of interest to identify compounds that could potentially replenish the changes in the apoptotic pathway, resulted from mutation. The gene network analysis using the Network Analyzer Plugin of Cytoscape (3.5.1) shows CFLAR and TRAF2 as influential genes in the apoptotic pathway. Mutation in these genes brings loss in apoptotic property of a cell and thus increases the cell proliferating activity. Thus, data on the molecular docking analysis of four natural compounds from Ottelia alismoides (L.) Pers with the two target proteins were reported. Flupenthixol and desmethylastemizole was found to be two efficient ligand molecules based on ligand-target interaction. In stereochemical quality assessment, the Ramachandran plot analysis of receptors indicates the better stereochemical characteristics for receptor-ligand interaction. Biomedical Informatics 2021-04-30 /pmc/articles/PMC8450155/ /pubmed/34602774 http://dx.doi.org/10.6026/97320630017470 Text en © 2021 Biomedical Informatics https://creativecommons.org/licenses/by/3.0/This is an Open Access article which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. This is distributed under the terms of the Creative Commons Attribution License.
spellingShingle Research Article
Das, Subrata
Talukdar, Anupam Das
Nath, Rajat
Nath, Deepa
Rahaman, Ashikur
Bhattacharjee, Shamee
Choudhury, Manbendra Dutta
Molecular docking analysis of flupenthixol and desmethylastemizole with the apoptotic regulator proteins CFLAR and TRAF2 linked to lung carcinoma
title Molecular docking analysis of flupenthixol and desmethylastemizole with the apoptotic regulator proteins CFLAR and TRAF2 linked to lung carcinoma
title_full Molecular docking analysis of flupenthixol and desmethylastemizole with the apoptotic regulator proteins CFLAR and TRAF2 linked to lung carcinoma
title_fullStr Molecular docking analysis of flupenthixol and desmethylastemizole with the apoptotic regulator proteins CFLAR and TRAF2 linked to lung carcinoma
title_full_unstemmed Molecular docking analysis of flupenthixol and desmethylastemizole with the apoptotic regulator proteins CFLAR and TRAF2 linked to lung carcinoma
title_short Molecular docking analysis of flupenthixol and desmethylastemizole with the apoptotic regulator proteins CFLAR and TRAF2 linked to lung carcinoma
title_sort molecular docking analysis of flupenthixol and desmethylastemizole with the apoptotic regulator proteins cflar and traf2 linked to lung carcinoma
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8450155/
https://www.ncbi.nlm.nih.gov/pubmed/34602774
http://dx.doi.org/10.6026/97320630017470
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