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Deep-Learning-Based Automatic Segmentation of Head and Neck Organs for Radiation Therapy in Dogs

Purpose: This study was conducted to develop a deep learning-based automatic segmentation (DLBAS) model of head and neck organs for radiotherapy (RT) in dogs, and to evaluate the feasibility for delineating the RT planning. Materials and Methods: The segmentation indicated that there were potentiall...

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Autores principales: Park, Jeongsu, Choi, Byoungsu, Ko, Jaeeun, Chun, Jaehee, Park, Inkyung, Lee, Juyoung, Kim, Jayon, Kim, Jaehwan, Eom, Kidong, Kim, Jin Sung
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8450455/
https://www.ncbi.nlm.nih.gov/pubmed/34552975
http://dx.doi.org/10.3389/fvets.2021.721612
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author Park, Jeongsu
Choi, Byoungsu
Ko, Jaeeun
Chun, Jaehee
Park, Inkyung
Lee, Juyoung
Kim, Jayon
Kim, Jaehwan
Eom, Kidong
Kim, Jin Sung
author_facet Park, Jeongsu
Choi, Byoungsu
Ko, Jaeeun
Chun, Jaehee
Park, Inkyung
Lee, Juyoung
Kim, Jayon
Kim, Jaehwan
Eom, Kidong
Kim, Jin Sung
author_sort Park, Jeongsu
collection PubMed
description Purpose: This study was conducted to develop a deep learning-based automatic segmentation (DLBAS) model of head and neck organs for radiotherapy (RT) in dogs, and to evaluate the feasibility for delineating the RT planning. Materials and Methods: The segmentation indicated that there were potentially 15 organs at risk (OARs) in the head and neck of dogs. Post-contrast computed tomography (CT) was performed in 90 dogs. The training and validation sets comprised 80 CT data sets, including 20 test sets. The accuracy of the segmentation was assessed using both the Dice similarity coefficient (DSC) and the Hausdorff distance (HD), and by referencing the expert contours as the ground truth. An additional 10 clinical test sets with relatively large displacement or deformation of organs were selected for verification in cancer patients. To evaluate the applicability in cancer patients, and the impact of expert intervention, three methods–HA, DLBAS, and the readjustment of the predicted data obtained via the DLBAS of the clinical test sets (HA_DLBAS)–were compared. Results: The DLBAS model (in the 20 test sets) showed reliable DSC and HD values; it also had a short contouring time of ~3 s. The average (mean ± standard deviation) DSC (0.83 ± 0.04) and HD (2.71 ± 1.01 mm) values were similar to those of previous human studies. The DLBAS was highly accurate and had no large displacement of head and neck organs. However, the DLBAS in the 10 clinical test sets showed lower DSC (0.78 ± 0.11) and higher HD (4.30 ± 3.69 mm) values than those of the test sets. The HA_DLBAS was comparable to both the HA (DSC: 0.85 ± 0.06 and HD: 2.74 ± 1.18 mm) and DLBAS presented better comparison metrics and decreased statistical deviations (DSC: 0.94 ± 0.03 and HD: 2.30 ± 0.41 mm). In addition, the contouring time of HA_DLBAS (30 min) was less than that of HA (80 min). Conclusion: In conclusion, HA_DLBAS method and the proposed DLBAS was highly consistent and robust in its performance. Thus, DLBAS has great potential as a single or supportive tool to the key process in RT planning.
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spelling pubmed-84504552021-09-21 Deep-Learning-Based Automatic Segmentation of Head and Neck Organs for Radiation Therapy in Dogs Park, Jeongsu Choi, Byoungsu Ko, Jaeeun Chun, Jaehee Park, Inkyung Lee, Juyoung Kim, Jayon Kim, Jaehwan Eom, Kidong Kim, Jin Sung Front Vet Sci Veterinary Science Purpose: This study was conducted to develop a deep learning-based automatic segmentation (DLBAS) model of head and neck organs for radiotherapy (RT) in dogs, and to evaluate the feasibility for delineating the RT planning. Materials and Methods: The segmentation indicated that there were potentially 15 organs at risk (OARs) in the head and neck of dogs. Post-contrast computed tomography (CT) was performed in 90 dogs. The training and validation sets comprised 80 CT data sets, including 20 test sets. The accuracy of the segmentation was assessed using both the Dice similarity coefficient (DSC) and the Hausdorff distance (HD), and by referencing the expert contours as the ground truth. An additional 10 clinical test sets with relatively large displacement or deformation of organs were selected for verification in cancer patients. To evaluate the applicability in cancer patients, and the impact of expert intervention, three methods–HA, DLBAS, and the readjustment of the predicted data obtained via the DLBAS of the clinical test sets (HA_DLBAS)–were compared. Results: The DLBAS model (in the 20 test sets) showed reliable DSC and HD values; it also had a short contouring time of ~3 s. The average (mean ± standard deviation) DSC (0.83 ± 0.04) and HD (2.71 ± 1.01 mm) values were similar to those of previous human studies. The DLBAS was highly accurate and had no large displacement of head and neck organs. However, the DLBAS in the 10 clinical test sets showed lower DSC (0.78 ± 0.11) and higher HD (4.30 ± 3.69 mm) values than those of the test sets. The HA_DLBAS was comparable to both the HA (DSC: 0.85 ± 0.06 and HD: 2.74 ± 1.18 mm) and DLBAS presented better comparison metrics and decreased statistical deviations (DSC: 0.94 ± 0.03 and HD: 2.30 ± 0.41 mm). In addition, the contouring time of HA_DLBAS (30 min) was less than that of HA (80 min). Conclusion: In conclusion, HA_DLBAS method and the proposed DLBAS was highly consistent and robust in its performance. Thus, DLBAS has great potential as a single or supportive tool to the key process in RT planning. Frontiers Media S.A. 2021-09-06 /pmc/articles/PMC8450455/ /pubmed/34552975 http://dx.doi.org/10.3389/fvets.2021.721612 Text en Copyright © 2021 Park, Choi, Ko, Chun, Park, Lee, Kim, Kim, Eom and Kim. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Veterinary Science
Park, Jeongsu
Choi, Byoungsu
Ko, Jaeeun
Chun, Jaehee
Park, Inkyung
Lee, Juyoung
Kim, Jayon
Kim, Jaehwan
Eom, Kidong
Kim, Jin Sung
Deep-Learning-Based Automatic Segmentation of Head and Neck Organs for Radiation Therapy in Dogs
title Deep-Learning-Based Automatic Segmentation of Head and Neck Organs for Radiation Therapy in Dogs
title_full Deep-Learning-Based Automatic Segmentation of Head and Neck Organs for Radiation Therapy in Dogs
title_fullStr Deep-Learning-Based Automatic Segmentation of Head and Neck Organs for Radiation Therapy in Dogs
title_full_unstemmed Deep-Learning-Based Automatic Segmentation of Head and Neck Organs for Radiation Therapy in Dogs
title_short Deep-Learning-Based Automatic Segmentation of Head and Neck Organs for Radiation Therapy in Dogs
title_sort deep-learning-based automatic segmentation of head and neck organs for radiation therapy in dogs
topic Veterinary Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8450455/
https://www.ncbi.nlm.nih.gov/pubmed/34552975
http://dx.doi.org/10.3389/fvets.2021.721612
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