Characterization of the complete chloroplast genome sequence of Diospyros kaki cv. Luotiantianshi

Diospyros kaki cv. Luotiantianshi is a rare germplasm of Diospyros Linn in the world. In this study, we generated the complete chloroplast (cp) genome of D. kaki cv. Luotiantianshi. The complete cp genome was 157,773 bp in length, containing a large single copy region (LSC) of 87,066 bp, a small sin...

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Autores principales: Xu, Yang, Wu, Kai-Yun, Gong, Bang-chu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8451684/
https://www.ncbi.nlm.nih.gov/pubmed/34553054
http://dx.doi.org/10.1080/23802359.2021.1972869
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author Xu, Yang
Wu, Kai-Yun
Gong, Bang-chu
author_facet Xu, Yang
Wu, Kai-Yun
Gong, Bang-chu
author_sort Xu, Yang
collection PubMed
description Diospyros kaki cv. Luotiantianshi is a rare germplasm of Diospyros Linn in the world. In this study, we generated the complete chloroplast (cp) genome of D. kaki cv. Luotiantianshi. The complete cp genome was 157,773 bp in length, containing a large single copy region (LSC) of 87,066 bp, a small single copy region (SSC) of 18,529 bp, and two inverted repeat (IR) regions of 26,089 bp. The new sequence has a total of 131 genes, including 86 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. Further, phylogenetic analysis showed that the D. kaki cv. Luotiantianshi has a close relationship with Diospyros kaki. This study provides important information for future evolution, genetic and molecular biology studies of Diospyros.
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spelling pubmed-84516842021-09-21 Characterization of the complete chloroplast genome sequence of Diospyros kaki cv. Luotiantianshi Xu, Yang Wu, Kai-Yun Gong, Bang-chu Mitochondrial DNA B Resour Mitogenome Announcement Diospyros kaki cv. Luotiantianshi is a rare germplasm of Diospyros Linn in the world. In this study, we generated the complete chloroplast (cp) genome of D. kaki cv. Luotiantianshi. The complete cp genome was 157,773 bp in length, containing a large single copy region (LSC) of 87,066 bp, a small single copy region (SSC) of 18,529 bp, and two inverted repeat (IR) regions of 26,089 bp. The new sequence has a total of 131 genes, including 86 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. Further, phylogenetic analysis showed that the D. kaki cv. Luotiantianshi has a close relationship with Diospyros kaki. This study provides important information for future evolution, genetic and molecular biology studies of Diospyros. Taylor & Francis 2021-09-15 /pmc/articles/PMC8451684/ /pubmed/34553054 http://dx.doi.org/10.1080/23802359.2021.1972869 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Xu, Yang
Wu, Kai-Yun
Gong, Bang-chu
Characterization of the complete chloroplast genome sequence of Diospyros kaki cv. Luotiantianshi
title Characterization of the complete chloroplast genome sequence of Diospyros kaki cv. Luotiantianshi
title_full Characterization of the complete chloroplast genome sequence of Diospyros kaki cv. Luotiantianshi
title_fullStr Characterization of the complete chloroplast genome sequence of Diospyros kaki cv. Luotiantianshi
title_full_unstemmed Characterization of the complete chloroplast genome sequence of Diospyros kaki cv. Luotiantianshi
title_short Characterization of the complete chloroplast genome sequence of Diospyros kaki cv. Luotiantianshi
title_sort characterization of the complete chloroplast genome sequence of diospyros kaki cv. luotiantianshi
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8451684/
https://www.ncbi.nlm.nih.gov/pubmed/34553054
http://dx.doi.org/10.1080/23802359.2021.1972869
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