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MRI index lesion radiomics and machine learning for detection of extraprostatic extension of disease: a multicenter study
OBJECTIVES: To build a machine learning (ML) model to detect extraprostatic extension (EPE) of prostate cancer (PCa), based on radiomics features extracted from prostate MRI index lesions. METHODS: Consecutive MRI exams of patients undergoing radical prostatectomy for PCa were retrospectively collec...
Autores principales: | , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer Berlin Heidelberg
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8452573/ https://www.ncbi.nlm.nih.gov/pubmed/33792737 http://dx.doi.org/10.1007/s00330-021-07856-3 |
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author | Cuocolo, Renato Stanzione, Arnaldo Faletti, Riccardo Gatti, Marco Calleris, Giorgio Fornari, Alberto Gentile, Francesco Motta, Aurelio Dell’Aversana, Serena Creta, Massimiliano Longo, Nicola Gontero, Paolo Cirillo, Stefano Fonio, Paolo Imbriaco, Massimo |
author_facet | Cuocolo, Renato Stanzione, Arnaldo Faletti, Riccardo Gatti, Marco Calleris, Giorgio Fornari, Alberto Gentile, Francesco Motta, Aurelio Dell’Aversana, Serena Creta, Massimiliano Longo, Nicola Gontero, Paolo Cirillo, Stefano Fonio, Paolo Imbriaco, Massimo |
author_sort | Cuocolo, Renato |
collection | PubMed |
description | OBJECTIVES: To build a machine learning (ML) model to detect extraprostatic extension (EPE) of prostate cancer (PCa), based on radiomics features extracted from prostate MRI index lesions. METHODS: Consecutive MRI exams of patients undergoing radical prostatectomy for PCa were retrospectively collected from three institutions. Axial T2-weighted and apparent diffusion coefficient map images were annotated to obtain index lesion volumes of interest for radiomics feature extraction. Data from one institution was used for training, feature selection (using reproducibility, variance and pairwise correlation analyses, and a correlation-based subset evaluator), and tuning of a support vector machine (SVM) algorithm, with stratified 10-fold cross-validation. The model was tested on the two remaining institutions’ data and compared with a baseline reference and expert radiologist assessment of EPE. RESULTS: In total, 193 patients were included. From an initial dataset of 2436 features, 2287 were excluded due to either poor stability, low variance, or high collinearity. Among the remaining, 14 features were used to train the ML model, which reached an overall accuracy of 83% in the training set. In the two external test sets, the SVM achieved an accuracy of 79% and 74% respectively, not statistically different from that of the radiologist (81–83%, p = 0.39–1) and outperforming the baseline reference (p = 0.001–0.02). CONCLUSIONS: A ML model solely based on radiomics features demonstrated high accuracy for EPE detection and good generalizability in a multicenter setting. Paired to qualitative EPE assessment, this approach could aid radiologists in this challenging task. KEY POINTS: • Predicting the presence of EPE in prostate cancer patients is a challenging task for radiologists. • A support vector machine algorithm achieved high diagnostic accuracy for EPE detection, with good generalizability when tested on multiple external datasets. • The performance of the algorithm was not significantly different from that of an experienced radiologist. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s00330-021-07856-3. |
format | Online Article Text |
id | pubmed-8452573 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Springer Berlin Heidelberg |
record_format | MEDLINE/PubMed |
spelling | pubmed-84525732021-10-05 MRI index lesion radiomics and machine learning for detection of extraprostatic extension of disease: a multicenter study Cuocolo, Renato Stanzione, Arnaldo Faletti, Riccardo Gatti, Marco Calleris, Giorgio Fornari, Alberto Gentile, Francesco Motta, Aurelio Dell’Aversana, Serena Creta, Massimiliano Longo, Nicola Gontero, Paolo Cirillo, Stefano Fonio, Paolo Imbriaco, Massimo Eur Radiol Magnetic Resonance OBJECTIVES: To build a machine learning (ML) model to detect extraprostatic extension (EPE) of prostate cancer (PCa), based on radiomics features extracted from prostate MRI index lesions. METHODS: Consecutive MRI exams of patients undergoing radical prostatectomy for PCa were retrospectively collected from three institutions. Axial T2-weighted and apparent diffusion coefficient map images were annotated to obtain index lesion volumes of interest for radiomics feature extraction. Data from one institution was used for training, feature selection (using reproducibility, variance and pairwise correlation analyses, and a correlation-based subset evaluator), and tuning of a support vector machine (SVM) algorithm, with stratified 10-fold cross-validation. The model was tested on the two remaining institutions’ data and compared with a baseline reference and expert radiologist assessment of EPE. RESULTS: In total, 193 patients were included. From an initial dataset of 2436 features, 2287 were excluded due to either poor stability, low variance, or high collinearity. Among the remaining, 14 features were used to train the ML model, which reached an overall accuracy of 83% in the training set. In the two external test sets, the SVM achieved an accuracy of 79% and 74% respectively, not statistically different from that of the radiologist (81–83%, p = 0.39–1) and outperforming the baseline reference (p = 0.001–0.02). CONCLUSIONS: A ML model solely based on radiomics features demonstrated high accuracy for EPE detection and good generalizability in a multicenter setting. Paired to qualitative EPE assessment, this approach could aid radiologists in this challenging task. KEY POINTS: • Predicting the presence of EPE in prostate cancer patients is a challenging task for radiologists. • A support vector machine algorithm achieved high diagnostic accuracy for EPE detection, with good generalizability when tested on multiple external datasets. • The performance of the algorithm was not significantly different from that of an experienced radiologist. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s00330-021-07856-3. Springer Berlin Heidelberg 2021-04-01 2021 /pmc/articles/PMC8452573/ /pubmed/33792737 http://dx.doi.org/10.1007/s00330-021-07856-3 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Magnetic Resonance Cuocolo, Renato Stanzione, Arnaldo Faletti, Riccardo Gatti, Marco Calleris, Giorgio Fornari, Alberto Gentile, Francesco Motta, Aurelio Dell’Aversana, Serena Creta, Massimiliano Longo, Nicola Gontero, Paolo Cirillo, Stefano Fonio, Paolo Imbriaco, Massimo MRI index lesion radiomics and machine learning for detection of extraprostatic extension of disease: a multicenter study |
title | MRI index lesion radiomics and machine learning for detection of extraprostatic extension of disease: a multicenter study |
title_full | MRI index lesion radiomics and machine learning for detection of extraprostatic extension of disease: a multicenter study |
title_fullStr | MRI index lesion radiomics and machine learning for detection of extraprostatic extension of disease: a multicenter study |
title_full_unstemmed | MRI index lesion radiomics and machine learning for detection of extraprostatic extension of disease: a multicenter study |
title_short | MRI index lesion radiomics and machine learning for detection of extraprostatic extension of disease: a multicenter study |
title_sort | mri index lesion radiomics and machine learning for detection of extraprostatic extension of disease: a multicenter study |
topic | Magnetic Resonance |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8452573/ https://www.ncbi.nlm.nih.gov/pubmed/33792737 http://dx.doi.org/10.1007/s00330-021-07856-3 |
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