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A New Subfamily of Glycoside Hydrolase Family 30 with Strict Xylobiohydrolase Function

The Acetivibrio clariflavus (basonym: Clostridium clariflavum) glycoside hydrolase family 30 cellulosomal protein encoded by the Clocl_1795 gene was highly represented during growth on cellulosic substrates. In this report, the recombinantly expressed protein has been characterized and shown to be a...

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Autores principales: Crooks, Casey, Bechle, Nathan J., St John, Franz J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8453022/
https://www.ncbi.nlm.nih.gov/pubmed/34557520
http://dx.doi.org/10.3389/fmolb.2021.714238
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author Crooks, Casey
Bechle, Nathan J.
St John, Franz J.
author_facet Crooks, Casey
Bechle, Nathan J.
St John, Franz J.
author_sort Crooks, Casey
collection PubMed
description The Acetivibrio clariflavus (basonym: Clostridium clariflavum) glycoside hydrolase family 30 cellulosomal protein encoded by the Clocl_1795 gene was highly represented during growth on cellulosic substrates. In this report, the recombinantly expressed protein has been characterized and shown to be a non-reducing terminal (NRT)-specific xylobiohydrolase (AcXbh30A). Biochemical function, optimal biophysical parameters, and phylogeny were investigated. The findings indicate that AcXbh30A strictly cleaves xylobiose from the NRT up until an α-1,2-linked glucuronic acid (GA)-decorated xylose if the number of xyloses is even or otherwise a single xylose will remain resulting in a penultimate GA-substituted xylose. Unlike recently reported xylobiohydrolases, AcXbh30A has no other detectable hydrolysis products under our optimized reaction conditions. Sequence analysis indicates that AcXbh30A represents a new GH30 subfamily. This new xylobiohydrolase may be useful for commercial production of industrial quantities of xylobiose.
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spelling pubmed-84530222021-09-22 A New Subfamily of Glycoside Hydrolase Family 30 with Strict Xylobiohydrolase Function Crooks, Casey Bechle, Nathan J. St John, Franz J. Front Mol Biosci Molecular Biosciences The Acetivibrio clariflavus (basonym: Clostridium clariflavum) glycoside hydrolase family 30 cellulosomal protein encoded by the Clocl_1795 gene was highly represented during growth on cellulosic substrates. In this report, the recombinantly expressed protein has been characterized and shown to be a non-reducing terminal (NRT)-specific xylobiohydrolase (AcXbh30A). Biochemical function, optimal biophysical parameters, and phylogeny were investigated. The findings indicate that AcXbh30A strictly cleaves xylobiose from the NRT up until an α-1,2-linked glucuronic acid (GA)-decorated xylose if the number of xyloses is even or otherwise a single xylose will remain resulting in a penultimate GA-substituted xylose. Unlike recently reported xylobiohydrolases, AcXbh30A has no other detectable hydrolysis products under our optimized reaction conditions. Sequence analysis indicates that AcXbh30A represents a new GH30 subfamily. This new xylobiohydrolase may be useful for commercial production of industrial quantities of xylobiose. Frontiers Media S.A. 2021-09-07 /pmc/articles/PMC8453022/ /pubmed/34557520 http://dx.doi.org/10.3389/fmolb.2021.714238 Text en Copyright © 2021 Crooks, Bechle and St John. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Molecular Biosciences
Crooks, Casey
Bechle, Nathan J.
St John, Franz J.
A New Subfamily of Glycoside Hydrolase Family 30 with Strict Xylobiohydrolase Function
title A New Subfamily of Glycoside Hydrolase Family 30 with Strict Xylobiohydrolase Function
title_full A New Subfamily of Glycoside Hydrolase Family 30 with Strict Xylobiohydrolase Function
title_fullStr A New Subfamily of Glycoside Hydrolase Family 30 with Strict Xylobiohydrolase Function
title_full_unstemmed A New Subfamily of Glycoside Hydrolase Family 30 with Strict Xylobiohydrolase Function
title_short A New Subfamily of Glycoside Hydrolase Family 30 with Strict Xylobiohydrolase Function
title_sort new subfamily of glycoside hydrolase family 30 with strict xylobiohydrolase function
topic Molecular Biosciences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8453022/
https://www.ncbi.nlm.nih.gov/pubmed/34557520
http://dx.doi.org/10.3389/fmolb.2021.714238
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