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The Vital Role of Central Executive Network in Brain Age: Evidence From Machine Learning and Transcriptional Signatures

Recent studies combining neuroimaging with machine learning methods successfully infer an individual’s brain age, and its discrepancy with the chronological age is used to identify age-related diseases. However, which brain networks play decisive roles in brain age prediction and the underlying biol...

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Autores principales: Fang, Keke, Han, Shaoqiang, Li, Yuming, Ding, Jing, Wu, Jilian, Zhang, Wenzhou
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8453084/
https://www.ncbi.nlm.nih.gov/pubmed/34557071
http://dx.doi.org/10.3389/fnins.2021.733316
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author Fang, Keke
Han, Shaoqiang
Li, Yuming
Ding, Jing
Wu, Jilian
Zhang, Wenzhou
author_facet Fang, Keke
Han, Shaoqiang
Li, Yuming
Ding, Jing
Wu, Jilian
Zhang, Wenzhou
author_sort Fang, Keke
collection PubMed
description Recent studies combining neuroimaging with machine learning methods successfully infer an individual’s brain age, and its discrepancy with the chronological age is used to identify age-related diseases. However, which brain networks play decisive roles in brain age prediction and the underlying biological basis of brain age remain unknown. To answer these questions, we estimated an individual’s brain age in the Southwest University Adult Lifespan Dataset (N = 492) from the gray matter volumes (GMV) derived from T1-weighted MRI scans by means of Gaussian process regression. Computational lesion analysis was performed to determine the importance of each brain network in brain age prediction. Then, we identified brain age-related genes by using prior brain-wide gene expression data, followed by gene enrichment analysis using Metascape. As a result, the prediction model successfully inferred an individual’s brain age and the computational lesion prediction results identified the central executive network as a vital network in brain age prediction (Steiger’s Z = 2.114, p = 0.035). In addition, the brain age-related genes were enriched in Gene Ontology (GO) processes/Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways grouped into numbers of clusters, such as regulation of iron transmembrane transport, synaptic signaling, synapse organization, retrograde endocannabinoid signaling (e.g., dopaminergic synapse), behavior (e.g., memory and associative learning), neurotransmitter secretion, and dendrite development. In all, these results reveal that the GMV of the central executive network played a vital role in predicting brain age and bridged the gap between transcriptome and neuroimaging promoting an integrative understanding of the pathophysiology of brain age.
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spelling pubmed-84530842021-09-22 The Vital Role of Central Executive Network in Brain Age: Evidence From Machine Learning and Transcriptional Signatures Fang, Keke Han, Shaoqiang Li, Yuming Ding, Jing Wu, Jilian Zhang, Wenzhou Front Neurosci Neuroscience Recent studies combining neuroimaging with machine learning methods successfully infer an individual’s brain age, and its discrepancy with the chronological age is used to identify age-related diseases. However, which brain networks play decisive roles in brain age prediction and the underlying biological basis of brain age remain unknown. To answer these questions, we estimated an individual’s brain age in the Southwest University Adult Lifespan Dataset (N = 492) from the gray matter volumes (GMV) derived from T1-weighted MRI scans by means of Gaussian process regression. Computational lesion analysis was performed to determine the importance of each brain network in brain age prediction. Then, we identified brain age-related genes by using prior brain-wide gene expression data, followed by gene enrichment analysis using Metascape. As a result, the prediction model successfully inferred an individual’s brain age and the computational lesion prediction results identified the central executive network as a vital network in brain age prediction (Steiger’s Z = 2.114, p = 0.035). In addition, the brain age-related genes were enriched in Gene Ontology (GO) processes/Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways grouped into numbers of clusters, such as regulation of iron transmembrane transport, synaptic signaling, synapse organization, retrograde endocannabinoid signaling (e.g., dopaminergic synapse), behavior (e.g., memory and associative learning), neurotransmitter secretion, and dendrite development. In all, these results reveal that the GMV of the central executive network played a vital role in predicting brain age and bridged the gap between transcriptome and neuroimaging promoting an integrative understanding of the pathophysiology of brain age. Frontiers Media S.A. 2021-09-07 /pmc/articles/PMC8453084/ /pubmed/34557071 http://dx.doi.org/10.3389/fnins.2021.733316 Text en Copyright © 2021 Fang, Han, Li, Ding, Wu and Zhang. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Neuroscience
Fang, Keke
Han, Shaoqiang
Li, Yuming
Ding, Jing
Wu, Jilian
Zhang, Wenzhou
The Vital Role of Central Executive Network in Brain Age: Evidence From Machine Learning and Transcriptional Signatures
title The Vital Role of Central Executive Network in Brain Age: Evidence From Machine Learning and Transcriptional Signatures
title_full The Vital Role of Central Executive Network in Brain Age: Evidence From Machine Learning and Transcriptional Signatures
title_fullStr The Vital Role of Central Executive Network in Brain Age: Evidence From Machine Learning and Transcriptional Signatures
title_full_unstemmed The Vital Role of Central Executive Network in Brain Age: Evidence From Machine Learning and Transcriptional Signatures
title_short The Vital Role of Central Executive Network in Brain Age: Evidence From Machine Learning and Transcriptional Signatures
title_sort vital role of central executive network in brain age: evidence from machine learning and transcriptional signatures
topic Neuroscience
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8453084/
https://www.ncbi.nlm.nih.gov/pubmed/34557071
http://dx.doi.org/10.3389/fnins.2021.733316
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