Cargando…

Transcriptome dataset of ethylene-treated Klutuk Wulung banana

Klutuk Wulung banana (Musa balbisiana Colla, BB Group) is a climacteric fruit whose ripening is influenced by ethylene production. This banana fruit has a relatively slow ripening process time and long shelf-life compared with A genome banana (Musa acuminata, AA). Bananas are usually harvested at a...

Descripción completa

Detalles Bibliográficos
Autores principales: Dwivany, Fenny Martha, Nugrahapraja, Husna, Sari, Lutfi Dewi Nirmala, Putri, Rika Rahma, Novianti, Cindy
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8455975/
https://www.ncbi.nlm.nih.gov/pubmed/34584916
http://dx.doi.org/10.1016/j.dib.2021.107376
_version_ 1784570777658458112
author Dwivany, Fenny Martha
Nugrahapraja, Husna
Sari, Lutfi Dewi Nirmala
Putri, Rika Rahma
Novianti, Cindy
author_facet Dwivany, Fenny Martha
Nugrahapraja, Husna
Sari, Lutfi Dewi Nirmala
Putri, Rika Rahma
Novianti, Cindy
author_sort Dwivany, Fenny Martha
collection PubMed
description Klutuk Wulung banana (Musa balbisiana Colla, BB Group) is a climacteric fruit whose ripening is influenced by ethylene production. This banana fruit has a relatively slow ripening process time and long shelf-life compared with A genome banana (Musa acuminata, AA). Bananas are usually harvested at a pre-climacteric stage and ripened artificially by exogenous ethylene. Hence, the application of exogenous ethylene at the pre-climacteric stage can accelerate the Klutuk Wulung banana ripening. However, there is no report regarding the effect of exogenous ethylene treatment on Klutuk Wulung banana global gene expression. The knowledge of global gene expression of ethylene treated Klutuk Wulung banana will help to understand this fruit ripening process. In this study, global gene expression data of untreated and ethylene treated Klutuk Wulung banana fruit during ripening were available. Total RNA was extracted from fruit pulp for differential expressed gene analysis using RNA-Seq. The RNA-Seq results obtained were ranged from 34,565,252 to 44,752,129 total reads, with 80.5% to 86.7% of reads were mapped against Klutuk Wulung banana genome reference derived from The Banana Genome Hub. In total, 29,968,128 to 37,776,907 transcripts were detected. The transcriptome data discussed in this article were deposited into NCBI's Gene Expression Omnibus (GEO) Series with an accession number GSE162077. These data can be used as information to identify gene candidates involved in fruit ripening for the application in banana postharvest program.
format Online
Article
Text
id pubmed-8455975
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Elsevier
record_format MEDLINE/PubMed
spelling pubmed-84559752021-09-27 Transcriptome dataset of ethylene-treated Klutuk Wulung banana Dwivany, Fenny Martha Nugrahapraja, Husna Sari, Lutfi Dewi Nirmala Putri, Rika Rahma Novianti, Cindy Data Brief Data Article Klutuk Wulung banana (Musa balbisiana Colla, BB Group) is a climacteric fruit whose ripening is influenced by ethylene production. This banana fruit has a relatively slow ripening process time and long shelf-life compared with A genome banana (Musa acuminata, AA). Bananas are usually harvested at a pre-climacteric stage and ripened artificially by exogenous ethylene. Hence, the application of exogenous ethylene at the pre-climacteric stage can accelerate the Klutuk Wulung banana ripening. However, there is no report regarding the effect of exogenous ethylene treatment on Klutuk Wulung banana global gene expression. The knowledge of global gene expression of ethylene treated Klutuk Wulung banana will help to understand this fruit ripening process. In this study, global gene expression data of untreated and ethylene treated Klutuk Wulung banana fruit during ripening were available. Total RNA was extracted from fruit pulp for differential expressed gene analysis using RNA-Seq. The RNA-Seq results obtained were ranged from 34,565,252 to 44,752,129 total reads, with 80.5% to 86.7% of reads were mapped against Klutuk Wulung banana genome reference derived from The Banana Genome Hub. In total, 29,968,128 to 37,776,907 transcripts were detected. The transcriptome data discussed in this article were deposited into NCBI's Gene Expression Omnibus (GEO) Series with an accession number GSE162077. These data can be used as information to identify gene candidates involved in fruit ripening for the application in banana postharvest program. Elsevier 2021-09-16 /pmc/articles/PMC8455975/ /pubmed/34584916 http://dx.doi.org/10.1016/j.dib.2021.107376 Text en © 2021 The Authors. Published by Elsevier Inc. https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Data Article
Dwivany, Fenny Martha
Nugrahapraja, Husna
Sari, Lutfi Dewi Nirmala
Putri, Rika Rahma
Novianti, Cindy
Transcriptome dataset of ethylene-treated Klutuk Wulung banana
title Transcriptome dataset of ethylene-treated Klutuk Wulung banana
title_full Transcriptome dataset of ethylene-treated Klutuk Wulung banana
title_fullStr Transcriptome dataset of ethylene-treated Klutuk Wulung banana
title_full_unstemmed Transcriptome dataset of ethylene-treated Klutuk Wulung banana
title_short Transcriptome dataset of ethylene-treated Klutuk Wulung banana
title_sort transcriptome dataset of ethylene-treated klutuk wulung banana
topic Data Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8455975/
https://www.ncbi.nlm.nih.gov/pubmed/34584916
http://dx.doi.org/10.1016/j.dib.2021.107376
work_keys_str_mv AT dwivanyfennymartha transcriptomedatasetofethylenetreatedklutukwulungbanana
AT nugrahaprajahusna transcriptomedatasetofethylenetreatedklutukwulungbanana
AT sarilutfidewinirmala transcriptomedatasetofethylenetreatedklutukwulungbanana
AT putririkarahma transcriptomedatasetofethylenetreatedklutukwulungbanana
AT novianticindy transcriptomedatasetofethylenetreatedklutukwulungbanana