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A primer on rhythm quantification for fish sounds: a Mediterranean case study

We have used a lately established workflow to quantify rhythms of three fish sound types recorded in different areas of the Mediterranean Sea. So far, the temporal structure of fish sound sequences has only been described qualitatively. Here, we propose a standardized approach to quantify them, open...

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Detalles Bibliográficos
Autores principales: Burchardt, Lara S., Picciulin, Marta, Parmentier, Eric, Bolgan, Marta
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Royal Society 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8456132/
https://www.ncbi.nlm.nih.gov/pubmed/34567587
http://dx.doi.org/10.1098/rsos.210494
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author Burchardt, Lara S.
Picciulin, Marta
Parmentier, Eric
Bolgan, Marta
author_facet Burchardt, Lara S.
Picciulin, Marta
Parmentier, Eric
Bolgan, Marta
author_sort Burchardt, Lara S.
collection PubMed
description We have used a lately established workflow to quantify rhythms of three fish sound types recorded in different areas of the Mediterranean Sea. So far, the temporal structure of fish sound sequences has only been described qualitatively. Here, we propose a standardized approach to quantify them, opening the path for assessment and comparison of an often underestimated but potentially critical aspect of fish sounds. Our approach is based on the analysis of inter-onset-intervals (IOIs), the intervals between the start of one sound element and the next. We calculate exact beats of a sequence using Fourier analysis and IOI analysis. Furthermore, we report on important parameters describing the variability in timing within a given sound sequence. Datasets were chosen to depict different possible rhythmic properties: Sciaena umbra sounds have a simple isochronous—metronome-like—rhythm. The /Kwa/ sound type emitted by Scorpaena spp. has a more complex rhythm, still presenting an underlying isochronous pattern. Calls of Ophidion rochei males present no rhythm, but a random temporal succession of sounds. This approach holds great potential for shedding light on important aspects of fish bioacoustics. Applications span from the characterization of specific behaviours to the potential discrimination of yet not distinguishable species.
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spelling pubmed-84561322021-09-23 A primer on rhythm quantification for fish sounds: a Mediterranean case study Burchardt, Lara S. Picciulin, Marta Parmentier, Eric Bolgan, Marta R Soc Open Sci Ecology, Conservation and Global Change Biology We have used a lately established workflow to quantify rhythms of three fish sound types recorded in different areas of the Mediterranean Sea. So far, the temporal structure of fish sound sequences has only been described qualitatively. Here, we propose a standardized approach to quantify them, opening the path for assessment and comparison of an often underestimated but potentially critical aspect of fish sounds. Our approach is based on the analysis of inter-onset-intervals (IOIs), the intervals between the start of one sound element and the next. We calculate exact beats of a sequence using Fourier analysis and IOI analysis. Furthermore, we report on important parameters describing the variability in timing within a given sound sequence. Datasets were chosen to depict different possible rhythmic properties: Sciaena umbra sounds have a simple isochronous—metronome-like—rhythm. The /Kwa/ sound type emitted by Scorpaena spp. has a more complex rhythm, still presenting an underlying isochronous pattern. Calls of Ophidion rochei males present no rhythm, but a random temporal succession of sounds. This approach holds great potential for shedding light on important aspects of fish bioacoustics. Applications span from the characterization of specific behaviours to the potential discrimination of yet not distinguishable species. The Royal Society 2021-09-22 /pmc/articles/PMC8456132/ /pubmed/34567587 http://dx.doi.org/10.1098/rsos.210494 Text en © 2021 The Authors. https://creativecommons.org/licenses/by/4.0/Published by the Royal Society under the terms of the Creative Commons Attribution License http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, provided the original author and source are credited.
spellingShingle Ecology, Conservation and Global Change Biology
Burchardt, Lara S.
Picciulin, Marta
Parmentier, Eric
Bolgan, Marta
A primer on rhythm quantification for fish sounds: a Mediterranean case study
title A primer on rhythm quantification for fish sounds: a Mediterranean case study
title_full A primer on rhythm quantification for fish sounds: a Mediterranean case study
title_fullStr A primer on rhythm quantification for fish sounds: a Mediterranean case study
title_full_unstemmed A primer on rhythm quantification for fish sounds: a Mediterranean case study
title_short A primer on rhythm quantification for fish sounds: a Mediterranean case study
title_sort primer on rhythm quantification for fish sounds: a mediterranean case study
topic Ecology, Conservation and Global Change Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8456132/
https://www.ncbi.nlm.nih.gov/pubmed/34567587
http://dx.doi.org/10.1098/rsos.210494
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