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Chalcogen Bonds in Selenocysteine Seleninic Acid, a Functional GPx Constituent, and in Other Seleninic or Sulfinic Acid Derivatives
The controlled oxidation reaction of L‐selenocystine under neutral pH conditions affords selenocysteine seleninic acid (3‐selenino‐L‐alanine) which is characterized also by means of single‐crystal X‐ray diffraction. This technique shows that selenium forms three chalcogen bonds (ChBs), one of them b...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8456948/ https://www.ncbi.nlm.nih.gov/pubmed/34214252 http://dx.doi.org/10.1002/asia.202100545 |
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author | Tripathi, Abhishek Daolio, Andrea Pizzi, Andrea Guo, Zhifang Turner, David R. Baggioli, Alberto Famulari, Antonino Deacon, Glen B. Resnati, Giuseppe Singh, Harkesh B. |
author_facet | Tripathi, Abhishek Daolio, Andrea Pizzi, Andrea Guo, Zhifang Turner, David R. Baggioli, Alberto Famulari, Antonino Deacon, Glen B. Resnati, Giuseppe Singh, Harkesh B. |
author_sort | Tripathi, Abhishek |
collection | PubMed |
description | The controlled oxidation reaction of L‐selenocystine under neutral pH conditions affords selenocysteine seleninic acid (3‐selenino‐L‐alanine) which is characterized also by means of single‐crystal X‐ray diffraction. This technique shows that selenium forms three chalcogen bonds (ChBs), one of them being outstandingly short. A survey of seleninic acid derivatives in the Cambridge Structural Database (CSD) confirms that the C−Se(=O)O− functionality tends to act as a ChB donor robust enough to systematically influence the interactional landscape in the solid. Quantum Theory of Atom in Molecules (QTAIM) analysis proves the attractive nature of the short contacts observed in crystals containing the seleninic functionality and calculation of surface molecular electrostatic potential (MEP) reveals that remarkably positive σ‐holes can frequently be found opposite to the covalent bonds at selenium. Both CSD searches and QTAIM and MEP approaches show that also the sulfinic acid moiety can function as a ChB donor, albeit less frequently than the seleninic acid one. These findings may contribute to a better understanding, at the atomic level, of the mechanism of action of the enzymes that control oxidative stress and ROS deactivation and that contain selenocysteine seleninic acid and cysteine sulfinic acid in the active site. |
format | Online Article Text |
id | pubmed-8456948 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-84569482021-09-27 Chalcogen Bonds in Selenocysteine Seleninic Acid, a Functional GPx Constituent, and in Other Seleninic or Sulfinic Acid Derivatives Tripathi, Abhishek Daolio, Andrea Pizzi, Andrea Guo, Zhifang Turner, David R. Baggioli, Alberto Famulari, Antonino Deacon, Glen B. Resnati, Giuseppe Singh, Harkesh B. Chem Asian J Full Papers The controlled oxidation reaction of L‐selenocystine under neutral pH conditions affords selenocysteine seleninic acid (3‐selenino‐L‐alanine) which is characterized also by means of single‐crystal X‐ray diffraction. This technique shows that selenium forms three chalcogen bonds (ChBs), one of them being outstandingly short. A survey of seleninic acid derivatives in the Cambridge Structural Database (CSD) confirms that the C−Se(=O)O− functionality tends to act as a ChB donor robust enough to systematically influence the interactional landscape in the solid. Quantum Theory of Atom in Molecules (QTAIM) analysis proves the attractive nature of the short contacts observed in crystals containing the seleninic functionality and calculation of surface molecular electrostatic potential (MEP) reveals that remarkably positive σ‐holes can frequently be found opposite to the covalent bonds at selenium. Both CSD searches and QTAIM and MEP approaches show that also the sulfinic acid moiety can function as a ChB donor, albeit less frequently than the seleninic acid one. These findings may contribute to a better understanding, at the atomic level, of the mechanism of action of the enzymes that control oxidative stress and ROS deactivation and that contain selenocysteine seleninic acid and cysteine sulfinic acid in the active site. John Wiley and Sons Inc. 2021-07-16 2021-08-16 /pmc/articles/PMC8456948/ /pubmed/34214252 http://dx.doi.org/10.1002/asia.202100545 Text en © 2021 The Authors. Chemistry - An Asian Journal published by Wiley-VCH GmbH https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Full Papers Tripathi, Abhishek Daolio, Andrea Pizzi, Andrea Guo, Zhifang Turner, David R. Baggioli, Alberto Famulari, Antonino Deacon, Glen B. Resnati, Giuseppe Singh, Harkesh B. Chalcogen Bonds in Selenocysteine Seleninic Acid, a Functional GPx Constituent, and in Other Seleninic or Sulfinic Acid Derivatives |
title | Chalcogen Bonds in Selenocysteine Seleninic Acid, a Functional GPx Constituent, and in Other Seleninic or Sulfinic Acid Derivatives |
title_full | Chalcogen Bonds in Selenocysteine Seleninic Acid, a Functional GPx Constituent, and in Other Seleninic or Sulfinic Acid Derivatives |
title_fullStr | Chalcogen Bonds in Selenocysteine Seleninic Acid, a Functional GPx Constituent, and in Other Seleninic or Sulfinic Acid Derivatives |
title_full_unstemmed | Chalcogen Bonds in Selenocysteine Seleninic Acid, a Functional GPx Constituent, and in Other Seleninic or Sulfinic Acid Derivatives |
title_short | Chalcogen Bonds in Selenocysteine Seleninic Acid, a Functional GPx Constituent, and in Other Seleninic or Sulfinic Acid Derivatives |
title_sort | chalcogen bonds in selenocysteine seleninic acid, a functional gpx constituent, and in other seleninic or sulfinic acid derivatives |
topic | Full Papers |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8456948/ https://www.ncbi.nlm.nih.gov/pubmed/34214252 http://dx.doi.org/10.1002/asia.202100545 |
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