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Identification and validation of a ferroptosis-related gene signature predictive of prognosis in breast cancer
Ferroptosis, a novel form of regulated cell death, is closely associated with the occurrence and development of malignant tumors. Here, we utilized a bioinformatics approach to identify ferroptosis-related genes to establish a robust and reliable prognostic signature in breast cancer (BC). Univariat...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Impact Journals
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8457571/ https://www.ncbi.nlm.nih.gov/pubmed/34499616 http://dx.doi.org/10.18632/aging.203472 |
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author | Liu, Qin Ma, Jian-Ying Wu, Gaosong |
author_facet | Liu, Qin Ma, Jian-Ying Wu, Gaosong |
author_sort | Liu, Qin |
collection | PubMed |
description | Ferroptosis, a novel form of regulated cell death, is closely associated with the occurrence and development of malignant tumors. Here, we utilized a bioinformatics approach to identify ferroptosis-related genes to establish a robust and reliable prognostic signature in breast cancer (BC). Univariate Cox regression and LASSO regression analyses of patient’s survival and gene expression data identified a prognostic signature consisting of 10 ferroptosis-related genes (FRGs). The signature demonstrated a favorable prediction performance, and was validated in two independent datasets, GSE21653 and GSE25066. Analyses of immune infiltrates, tumor microenvironment, immune checkpoints, mutations, drug sensitivity, and clinicopathological features revealed significant differences between low- and high-risk BC patients. A multivariate analysis revealed that the signature was an independent prognostic predictor in BC, and a nomogram combining the risk score and tumor stage intuitively displayed high accuracy and reliability with respect to predicting the survival outcomes of BC patients. These findings indicate that the identified prognostic signature is a potential indicator predictive of prognosis and immunotherapeutic responses in BC patients. |
format | Online Article Text |
id | pubmed-8457571 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Impact Journals |
record_format | MEDLINE/PubMed |
spelling | pubmed-84575712021-09-23 Identification and validation of a ferroptosis-related gene signature predictive of prognosis in breast cancer Liu, Qin Ma, Jian-Ying Wu, Gaosong Aging (Albany NY) Research Paper Ferroptosis, a novel form of regulated cell death, is closely associated with the occurrence and development of malignant tumors. Here, we utilized a bioinformatics approach to identify ferroptosis-related genes to establish a robust and reliable prognostic signature in breast cancer (BC). Univariate Cox regression and LASSO regression analyses of patient’s survival and gene expression data identified a prognostic signature consisting of 10 ferroptosis-related genes (FRGs). The signature demonstrated a favorable prediction performance, and was validated in two independent datasets, GSE21653 and GSE25066. Analyses of immune infiltrates, tumor microenvironment, immune checkpoints, mutations, drug sensitivity, and clinicopathological features revealed significant differences between low- and high-risk BC patients. A multivariate analysis revealed that the signature was an independent prognostic predictor in BC, and a nomogram combining the risk score and tumor stage intuitively displayed high accuracy and reliability with respect to predicting the survival outcomes of BC patients. These findings indicate that the identified prognostic signature is a potential indicator predictive of prognosis and immunotherapeutic responses in BC patients. Impact Journals 2021-09-09 /pmc/articles/PMC8457571/ /pubmed/34499616 http://dx.doi.org/10.18632/aging.203472 Text en Copyright: © 2021 Liu et al. https://creativecommons.org/licenses/by/3.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/3.0/) (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Paper Liu, Qin Ma, Jian-Ying Wu, Gaosong Identification and validation of a ferroptosis-related gene signature predictive of prognosis in breast cancer |
title | Identification and validation of a ferroptosis-related gene signature predictive of prognosis in breast cancer |
title_full | Identification and validation of a ferroptosis-related gene signature predictive of prognosis in breast cancer |
title_fullStr | Identification and validation of a ferroptosis-related gene signature predictive of prognosis in breast cancer |
title_full_unstemmed | Identification and validation of a ferroptosis-related gene signature predictive of prognosis in breast cancer |
title_short | Identification and validation of a ferroptosis-related gene signature predictive of prognosis in breast cancer |
title_sort | identification and validation of a ferroptosis-related gene signature predictive of prognosis in breast cancer |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8457571/ https://www.ncbi.nlm.nih.gov/pubmed/34499616 http://dx.doi.org/10.18632/aging.203472 |
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