Cargando…

Identification and validation of a ferroptosis-related gene signature predictive of prognosis in breast cancer

Ferroptosis, a novel form of regulated cell death, is closely associated with the occurrence and development of malignant tumors. Here, we utilized a bioinformatics approach to identify ferroptosis-related genes to establish a robust and reliable prognostic signature in breast cancer (BC). Univariat...

Descripción completa

Detalles Bibliográficos
Autores principales: Liu, Qin, Ma, Jian-Ying, Wu, Gaosong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Impact Journals 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8457571/
https://www.ncbi.nlm.nih.gov/pubmed/34499616
http://dx.doi.org/10.18632/aging.203472
_version_ 1784571125361016832
author Liu, Qin
Ma, Jian-Ying
Wu, Gaosong
author_facet Liu, Qin
Ma, Jian-Ying
Wu, Gaosong
author_sort Liu, Qin
collection PubMed
description Ferroptosis, a novel form of regulated cell death, is closely associated with the occurrence and development of malignant tumors. Here, we utilized a bioinformatics approach to identify ferroptosis-related genes to establish a robust and reliable prognostic signature in breast cancer (BC). Univariate Cox regression and LASSO regression analyses of patient’s survival and gene expression data identified a prognostic signature consisting of 10 ferroptosis-related genes (FRGs). The signature demonstrated a favorable prediction performance, and was validated in two independent datasets, GSE21653 and GSE25066. Analyses of immune infiltrates, tumor microenvironment, immune checkpoints, mutations, drug sensitivity, and clinicopathological features revealed significant differences between low- and high-risk BC patients. A multivariate analysis revealed that the signature was an independent prognostic predictor in BC, and a nomogram combining the risk score and tumor stage intuitively displayed high accuracy and reliability with respect to predicting the survival outcomes of BC patients. These findings indicate that the identified prognostic signature is a potential indicator predictive of prognosis and immunotherapeutic responses in BC patients.
format Online
Article
Text
id pubmed-8457571
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Impact Journals
record_format MEDLINE/PubMed
spelling pubmed-84575712021-09-23 Identification and validation of a ferroptosis-related gene signature predictive of prognosis in breast cancer Liu, Qin Ma, Jian-Ying Wu, Gaosong Aging (Albany NY) Research Paper Ferroptosis, a novel form of regulated cell death, is closely associated with the occurrence and development of malignant tumors. Here, we utilized a bioinformatics approach to identify ferroptosis-related genes to establish a robust and reliable prognostic signature in breast cancer (BC). Univariate Cox regression and LASSO regression analyses of patient’s survival and gene expression data identified a prognostic signature consisting of 10 ferroptosis-related genes (FRGs). The signature demonstrated a favorable prediction performance, and was validated in two independent datasets, GSE21653 and GSE25066. Analyses of immune infiltrates, tumor microenvironment, immune checkpoints, mutations, drug sensitivity, and clinicopathological features revealed significant differences between low- and high-risk BC patients. A multivariate analysis revealed that the signature was an independent prognostic predictor in BC, and a nomogram combining the risk score and tumor stage intuitively displayed high accuracy and reliability with respect to predicting the survival outcomes of BC patients. These findings indicate that the identified prognostic signature is a potential indicator predictive of prognosis and immunotherapeutic responses in BC patients. Impact Journals 2021-09-09 /pmc/articles/PMC8457571/ /pubmed/34499616 http://dx.doi.org/10.18632/aging.203472 Text en Copyright: © 2021 Liu et al. https://creativecommons.org/licenses/by/3.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/3.0/) (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Paper
Liu, Qin
Ma, Jian-Ying
Wu, Gaosong
Identification and validation of a ferroptosis-related gene signature predictive of prognosis in breast cancer
title Identification and validation of a ferroptosis-related gene signature predictive of prognosis in breast cancer
title_full Identification and validation of a ferroptosis-related gene signature predictive of prognosis in breast cancer
title_fullStr Identification and validation of a ferroptosis-related gene signature predictive of prognosis in breast cancer
title_full_unstemmed Identification and validation of a ferroptosis-related gene signature predictive of prognosis in breast cancer
title_short Identification and validation of a ferroptosis-related gene signature predictive of prognosis in breast cancer
title_sort identification and validation of a ferroptosis-related gene signature predictive of prognosis in breast cancer
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8457571/
https://www.ncbi.nlm.nih.gov/pubmed/34499616
http://dx.doi.org/10.18632/aging.203472
work_keys_str_mv AT liuqin identificationandvalidationofaferroptosisrelatedgenesignaturepredictiveofprognosisinbreastcancer
AT majianying identificationandvalidationofaferroptosisrelatedgenesignaturepredictiveofprognosisinbreastcancer
AT wugaosong identificationandvalidationofaferroptosisrelatedgenesignaturepredictiveofprognosisinbreastcancer