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Micro-CT protocols for scanning and 3D analysis of Hexaplextrunculus during its different life stages

Micro-computed tomography (micro-CT) is a high-resolution 3D-imaging technique which is now increasingly applied in biological studies focusing on taxonomy and functional morphology. The creation of virtual representations of specimens can increase availability of otherwise underexploited and inacce...

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Detalles Bibliográficos
Autores principales: Chatzinikolaou, Eva, Keklikoglou, Kleoniki
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Pensoft Publishers 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8458271/
https://www.ncbi.nlm.nih.gov/pubmed/34616212
http://dx.doi.org/10.3897/BDJ.9.e71542
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author Chatzinikolaou, Eva
Keklikoglou, Kleoniki
author_facet Chatzinikolaou, Eva
Keklikoglou, Kleoniki
author_sort Chatzinikolaou, Eva
collection PubMed
description Micro-computed tomography (micro-CT) is a high-resolution 3D-imaging technique which is now increasingly applied in biological studies focusing on taxonomy and functional morphology. The creation of virtual representations of specimens can increase availability of otherwise underexploited and inaccessible samples. The 3D model dataset can be also further processed through volume rendering and morphometric analysis. The success of micro-CT as a visualisation technique depends on several methodological manipulations, including the use of contrast enhancing staining agents, filters, scanning mediums, containers, exposure time and frame averaging. The aim of this study was to standardise a series of micro-CT scanning and 3D analysis protocols for a marine gastropod species, Hexaplextrunculus. The analytical protocols have followed all the developmental stages of this gastropod, from egg capsules and embryos to juveniles and adults.
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spelling pubmed-84582712021-10-05 Micro-CT protocols for scanning and 3D analysis of Hexaplextrunculus during its different life stages Chatzinikolaou, Eva Keklikoglou, Kleoniki Biodivers Data J Methods Micro-computed tomography (micro-CT) is a high-resolution 3D-imaging technique which is now increasingly applied in biological studies focusing on taxonomy and functional morphology. The creation of virtual representations of specimens can increase availability of otherwise underexploited and inaccessible samples. The 3D model dataset can be also further processed through volume rendering and morphometric analysis. The success of micro-CT as a visualisation technique depends on several methodological manipulations, including the use of contrast enhancing staining agents, filters, scanning mediums, containers, exposure time and frame averaging. The aim of this study was to standardise a series of micro-CT scanning and 3D analysis protocols for a marine gastropod species, Hexaplextrunculus. The analytical protocols have followed all the developmental stages of this gastropod, from egg capsules and embryos to juveniles and adults. Pensoft Publishers 2021-09-15 /pmc/articles/PMC8458271/ /pubmed/34616212 http://dx.doi.org/10.3897/BDJ.9.e71542 Text en Eva Chatzinikolaou, Kleoniki Keklikoglou https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Methods
Chatzinikolaou, Eva
Keklikoglou, Kleoniki
Micro-CT protocols for scanning and 3D analysis of Hexaplextrunculus during its different life stages
title Micro-CT protocols for scanning and 3D analysis of Hexaplextrunculus during its different life stages
title_full Micro-CT protocols for scanning and 3D analysis of Hexaplextrunculus during its different life stages
title_fullStr Micro-CT protocols for scanning and 3D analysis of Hexaplextrunculus during its different life stages
title_full_unstemmed Micro-CT protocols for scanning and 3D analysis of Hexaplextrunculus during its different life stages
title_short Micro-CT protocols for scanning and 3D analysis of Hexaplextrunculus during its different life stages
title_sort micro-ct protocols for scanning and 3d analysis of hexaplextrunculus during its different life stages
topic Methods
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8458271/
https://www.ncbi.nlm.nih.gov/pubmed/34616212
http://dx.doi.org/10.3897/BDJ.9.e71542
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