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Examining the effects of cigarette smoke on mouse lens through a multi OMIC approach
Here, we report a multi OMIC (transcriptome, proteome, and metabolome) approach to investigate molecular changes in lens fiber cells (FC) of mice exposed to cigarette smoke (CS). Pregnant mice were placed in a whole-body smoke chamber and a few days later pups were born, which were exposed to CS for...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8458305/ https://www.ncbi.nlm.nih.gov/pubmed/34552108 http://dx.doi.org/10.1038/s41598-021-95013-7 |
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author | Khan, Shahid Y. Ali, Muhammad Jang, Yura Ryu, Taekyung Schwab, Andrew J. Ingram, Brian O. Cable, Peter H. Na, Chan Hyun Handa, James T. Riazuddin, S. Amer |
author_facet | Khan, Shahid Y. Ali, Muhammad Jang, Yura Ryu, Taekyung Schwab, Andrew J. Ingram, Brian O. Cable, Peter H. Na, Chan Hyun Handa, James T. Riazuddin, S. Amer |
author_sort | Khan, Shahid Y. |
collection | PubMed |
description | Here, we report a multi OMIC (transcriptome, proteome, and metabolome) approach to investigate molecular changes in lens fiber cells (FC) of mice exposed to cigarette smoke (CS). Pregnant mice were placed in a whole-body smoke chamber and a few days later pups were born, which were exposed to CS for 5 hours/day, 5 days/week for a total of 3½ months. We examined the mice exposed to CS for CS-related cataractogenesis after completion of the CS exposure but no cataracts were observed. Lenses of CS-exposed and age-matched, untreated control mice were extracted and lens FC were subjected to multi OMIC profiling. We identified 348 genes, 130 proteins, and 14 metabolites exhibiting significant (p < 0.05) differential levels in lens FC of mice exposed to CS, corresponding to 3.6%, 4.3%, and 5.0% of the total genes, protein, and metabolites, respectively identified in this study. Our multi OMIC approach confirmed that only a small fraction of the transcriptome, the proteome, and the metabolome was perturbed in the lens FC of mice exposed to CS, which suggests that exposure of CS had a minimal effect on the mouse lens. It is worth noting that while our results confirm that CS exposure does not have a substantial impact on the molecular landscape of the mouse lens FC, we cannot rule out that CS exposure for longer durations and/or in combination with other morbidities or environmental factors would have a more robust effect and/or result in cataractogenesis. |
format | Online Article Text |
id | pubmed-8458305 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-84583052021-09-24 Examining the effects of cigarette smoke on mouse lens through a multi OMIC approach Khan, Shahid Y. Ali, Muhammad Jang, Yura Ryu, Taekyung Schwab, Andrew J. Ingram, Brian O. Cable, Peter H. Na, Chan Hyun Handa, James T. Riazuddin, S. Amer Sci Rep Article Here, we report a multi OMIC (transcriptome, proteome, and metabolome) approach to investigate molecular changes in lens fiber cells (FC) of mice exposed to cigarette smoke (CS). Pregnant mice were placed in a whole-body smoke chamber and a few days later pups were born, which were exposed to CS for 5 hours/day, 5 days/week for a total of 3½ months. We examined the mice exposed to CS for CS-related cataractogenesis after completion of the CS exposure but no cataracts were observed. Lenses of CS-exposed and age-matched, untreated control mice were extracted and lens FC were subjected to multi OMIC profiling. We identified 348 genes, 130 proteins, and 14 metabolites exhibiting significant (p < 0.05) differential levels in lens FC of mice exposed to CS, corresponding to 3.6%, 4.3%, and 5.0% of the total genes, protein, and metabolites, respectively identified in this study. Our multi OMIC approach confirmed that only a small fraction of the transcriptome, the proteome, and the metabolome was perturbed in the lens FC of mice exposed to CS, which suggests that exposure of CS had a minimal effect on the mouse lens. It is worth noting that while our results confirm that CS exposure does not have a substantial impact on the molecular landscape of the mouse lens FC, we cannot rule out that CS exposure for longer durations and/or in combination with other morbidities or environmental factors would have a more robust effect and/or result in cataractogenesis. Nature Publishing Group UK 2021-09-22 /pmc/articles/PMC8458305/ /pubmed/34552108 http://dx.doi.org/10.1038/s41598-021-95013-7 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Khan, Shahid Y. Ali, Muhammad Jang, Yura Ryu, Taekyung Schwab, Andrew J. Ingram, Brian O. Cable, Peter H. Na, Chan Hyun Handa, James T. Riazuddin, S. Amer Examining the effects of cigarette smoke on mouse lens through a multi OMIC approach |
title | Examining the effects of cigarette smoke on mouse lens through a multi OMIC approach |
title_full | Examining the effects of cigarette smoke on mouse lens through a multi OMIC approach |
title_fullStr | Examining the effects of cigarette smoke on mouse lens through a multi OMIC approach |
title_full_unstemmed | Examining the effects of cigarette smoke on mouse lens through a multi OMIC approach |
title_short | Examining the effects of cigarette smoke on mouse lens through a multi OMIC approach |
title_sort | examining the effects of cigarette smoke on mouse lens through a multi omic approach |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8458305/ https://www.ncbi.nlm.nih.gov/pubmed/34552108 http://dx.doi.org/10.1038/s41598-021-95013-7 |
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