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Insights into the gut bacterial communities of spider from wild with no evidence of phylosymbiosis
In the present study, an effort has been made to elucidate the gut bacterial diversity of twelve species of the family Araneidae under three subfamilies collected from 5 states of India along with their predicted metabolic role in functional metabolism. Further, we also compared the host species phy...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8459122/ https://www.ncbi.nlm.nih.gov/pubmed/34588907 http://dx.doi.org/10.1016/j.sjbs.2021.06.059 |
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author | Tyagi, Kaomud Tyagi, Inderjeet Kumar, Vikas |
author_facet | Tyagi, Kaomud Tyagi, Inderjeet Kumar, Vikas |
author_sort | Tyagi, Kaomud |
collection | PubMed |
description | In the present study, an effort has been made to elucidate the gut bacterial diversity of twelve species of the family Araneidae under three subfamilies collected from 5 states of India along with their predicted metabolic role in functional metabolism. Further, we also compared the host species phylogeny based on partial cytochrome c oxidase subunit I (COI) sequences with the gut bacteria composition dendrogram to decipher the phylosymbiotic relationships. Analysis revealed the presence of 22 bacterial phyla, 145 families, and 364 genera in the gut, with Proteobacteria, Firmicutes, Actinobacteria, and Deinococcus-Thermus as the highest abundant phyla. Moreover, phylum Bacteriodetes was dominated only in Cyclosa mulmeinensis and Chlamydiae in Neoscona bengalensis. At the genus level, Bacillus, Acinetobacter, Cutibacterium, Pseudomonas, and Staphylococcus were the most dominant genera. Furthermore, the genus Prevotella was observed only in Cyclosa mulmeinensis, and endosymbiont Wolbachia only in Eriovixia laglaizei. The differential abundance analysis (DeSeq2) revealed the 19 significant ASVs represented by the genera like Acinetobacter, Vagoccoccus, Prevotella, Staphylococcus, Curvibacter, Corynebacterium, Paracoccus, Streptococcus, Microbacterium, and Pseudocitrobacter. The inter- and intra-subfamilies comparison based on diversity indices (alpha and beta diversity) revealed that the subfamily Araneinae have high richness and diversity than Argiopinae and Gasteracanthinae. The phylosymbiotic analysis revealed that there is no congruence between the gut bacteria composition dendrogram with their host phylogeny. |
format | Online Article Text |
id | pubmed-8459122 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-84591222021-09-28 Insights into the gut bacterial communities of spider from wild with no evidence of phylosymbiosis Tyagi, Kaomud Tyagi, Inderjeet Kumar, Vikas Saudi J Biol Sci Original Article In the present study, an effort has been made to elucidate the gut bacterial diversity of twelve species of the family Araneidae under three subfamilies collected from 5 states of India along with their predicted metabolic role in functional metabolism. Further, we also compared the host species phylogeny based on partial cytochrome c oxidase subunit I (COI) sequences with the gut bacteria composition dendrogram to decipher the phylosymbiotic relationships. Analysis revealed the presence of 22 bacterial phyla, 145 families, and 364 genera in the gut, with Proteobacteria, Firmicutes, Actinobacteria, and Deinococcus-Thermus as the highest abundant phyla. Moreover, phylum Bacteriodetes was dominated only in Cyclosa mulmeinensis and Chlamydiae in Neoscona bengalensis. At the genus level, Bacillus, Acinetobacter, Cutibacterium, Pseudomonas, and Staphylococcus were the most dominant genera. Furthermore, the genus Prevotella was observed only in Cyclosa mulmeinensis, and endosymbiont Wolbachia only in Eriovixia laglaizei. The differential abundance analysis (DeSeq2) revealed the 19 significant ASVs represented by the genera like Acinetobacter, Vagoccoccus, Prevotella, Staphylococcus, Curvibacter, Corynebacterium, Paracoccus, Streptococcus, Microbacterium, and Pseudocitrobacter. The inter- and intra-subfamilies comparison based on diversity indices (alpha and beta diversity) revealed that the subfamily Araneinae have high richness and diversity than Argiopinae and Gasteracanthinae. The phylosymbiotic analysis revealed that there is no congruence between the gut bacteria composition dendrogram with their host phylogeny. Elsevier 2021-10 2021-06-24 /pmc/articles/PMC8459122/ /pubmed/34588907 http://dx.doi.org/10.1016/j.sjbs.2021.06.059 Text en © 2021 The Author(s) https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Original Article Tyagi, Kaomud Tyagi, Inderjeet Kumar, Vikas Insights into the gut bacterial communities of spider from wild with no evidence of phylosymbiosis |
title | Insights into the gut bacterial communities of spider from wild with no evidence of phylosymbiosis |
title_full | Insights into the gut bacterial communities of spider from wild with no evidence of phylosymbiosis |
title_fullStr | Insights into the gut bacterial communities of spider from wild with no evidence of phylosymbiosis |
title_full_unstemmed | Insights into the gut bacterial communities of spider from wild with no evidence of phylosymbiosis |
title_short | Insights into the gut bacterial communities of spider from wild with no evidence of phylosymbiosis |
title_sort | insights into the gut bacterial communities of spider from wild with no evidence of phylosymbiosis |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8459122/ https://www.ncbi.nlm.nih.gov/pubmed/34588907 http://dx.doi.org/10.1016/j.sjbs.2021.06.059 |
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