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Using machine learning for predicting intensive care unit resource use during the COVID-19 pandemic in Denmark

The COVID-19 pandemic has put massive strains on hospitals, and tools to guide hospital planners in resource allocation during the ebbs and flows of the pandemic are urgently needed. We investigate whether machine learning (ML) can be used for predictions of intensive care requirements a fixed numbe...

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Autores principales: Lorenzen, Stephan Sloth, Nielsen, Mads, Jimenez-Solem, Espen, Petersen, Tonny Studsgaard, Perner, Anders, Thorsen-Meyer, Hans-Christian, Igel, Christian, Sillesen, Martin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8460747/
https://www.ncbi.nlm.nih.gov/pubmed/34556789
http://dx.doi.org/10.1038/s41598-021-98617-1
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author Lorenzen, Stephan Sloth
Nielsen, Mads
Jimenez-Solem, Espen
Petersen, Tonny Studsgaard
Perner, Anders
Thorsen-Meyer, Hans-Christian
Igel, Christian
Sillesen, Martin
author_facet Lorenzen, Stephan Sloth
Nielsen, Mads
Jimenez-Solem, Espen
Petersen, Tonny Studsgaard
Perner, Anders
Thorsen-Meyer, Hans-Christian
Igel, Christian
Sillesen, Martin
author_sort Lorenzen, Stephan Sloth
collection PubMed
description The COVID-19 pandemic has put massive strains on hospitals, and tools to guide hospital planners in resource allocation during the ebbs and flows of the pandemic are urgently needed. We investigate whether machine learning (ML) can be used for predictions of intensive care requirements a fixed number of days into the future. Retrospective design where health Records from 42,526 SARS-CoV-2 positive patients in Denmark was extracted. Random Forest (RF) models were trained to predict risk of ICU admission and use of mechanical ventilation after n days (n = 1, 2, …, 15). An extended analysis was provided for n = 5 and n = 10. Models predicted n-day risk of ICU admission with an area under the receiver operator characteristic curve (ROC-AUC) between 0.981 and 0.995, and n-day risk of use of ventilation with an ROC-AUC between 0.982 and 0.997. The corresponding n-day forecasting models predicted the needed ICU capacity with a coefficient of determination (R(2)) between 0.334 and 0.989 and use of ventilation with an R(2) between 0.446 and 0.973. The forecasting models performed worst, when forecasting many days into the future (for large n). For n = 5, ICU capacity was predicted with ROC-AUC 0.990 and R(2) 0.928, and use of ventilator was predicted with ROC-AUC 0.994 and R(2) 0.854. Random Forest-based modelling can be used for accurate n-day forecasting predictions of ICU resource requirements, when n is not too large.
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spelling pubmed-84607472021-09-27 Using machine learning for predicting intensive care unit resource use during the COVID-19 pandemic in Denmark Lorenzen, Stephan Sloth Nielsen, Mads Jimenez-Solem, Espen Petersen, Tonny Studsgaard Perner, Anders Thorsen-Meyer, Hans-Christian Igel, Christian Sillesen, Martin Sci Rep Article The COVID-19 pandemic has put massive strains on hospitals, and tools to guide hospital planners in resource allocation during the ebbs and flows of the pandemic are urgently needed. We investigate whether machine learning (ML) can be used for predictions of intensive care requirements a fixed number of days into the future. Retrospective design where health Records from 42,526 SARS-CoV-2 positive patients in Denmark was extracted. Random Forest (RF) models were trained to predict risk of ICU admission and use of mechanical ventilation after n days (n = 1, 2, …, 15). An extended analysis was provided for n = 5 and n = 10. Models predicted n-day risk of ICU admission with an area under the receiver operator characteristic curve (ROC-AUC) between 0.981 and 0.995, and n-day risk of use of ventilation with an ROC-AUC between 0.982 and 0.997. The corresponding n-day forecasting models predicted the needed ICU capacity with a coefficient of determination (R(2)) between 0.334 and 0.989 and use of ventilation with an R(2) between 0.446 and 0.973. The forecasting models performed worst, when forecasting many days into the future (for large n). For n = 5, ICU capacity was predicted with ROC-AUC 0.990 and R(2) 0.928, and use of ventilator was predicted with ROC-AUC 0.994 and R(2) 0.854. Random Forest-based modelling can be used for accurate n-day forecasting predictions of ICU resource requirements, when n is not too large. Nature Publishing Group UK 2021-09-23 /pmc/articles/PMC8460747/ /pubmed/34556789 http://dx.doi.org/10.1038/s41598-021-98617-1 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Lorenzen, Stephan Sloth
Nielsen, Mads
Jimenez-Solem, Espen
Petersen, Tonny Studsgaard
Perner, Anders
Thorsen-Meyer, Hans-Christian
Igel, Christian
Sillesen, Martin
Using machine learning for predicting intensive care unit resource use during the COVID-19 pandemic in Denmark
title Using machine learning for predicting intensive care unit resource use during the COVID-19 pandemic in Denmark
title_full Using machine learning for predicting intensive care unit resource use during the COVID-19 pandemic in Denmark
title_fullStr Using machine learning for predicting intensive care unit resource use during the COVID-19 pandemic in Denmark
title_full_unstemmed Using machine learning for predicting intensive care unit resource use during the COVID-19 pandemic in Denmark
title_short Using machine learning for predicting intensive care unit resource use during the COVID-19 pandemic in Denmark
title_sort using machine learning for predicting intensive care unit resource use during the covid-19 pandemic in denmark
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8460747/
https://www.ncbi.nlm.nih.gov/pubmed/34556789
http://dx.doi.org/10.1038/s41598-021-98617-1
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