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A Closed-Loop Optogenetic Platform

Neuromodulation is an established treatment for numerous neurological conditions, but to expand the therapeutic scope there is a need to improve the spatial, temporal and cell-type specificity of stimulation. Optogenetics is a promising area of current research, enabling optical stimulation of genet...

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Autores principales: Firfilionis, Dimitrios, Hutchings, Frances, Tamadoni, Reza, Walsh, Darren, Turnbull, Mark, Escobedo-Cousin, Enrique, Bailey, Richard G., Gausden, Johannes, Patel, Aaliyah, Haci, Dorian, Liu, Yan, LeBeau, Fiona E. N., Trevelyan, Andrew, Constandinou, Timothy G., O'Neill, Anthony, Kaiser, Marcus, Degenaar, Patrick, Jackson, Andrew
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8462298/
https://www.ncbi.nlm.nih.gov/pubmed/34566564
http://dx.doi.org/10.3389/fnins.2021.718311
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author Firfilionis, Dimitrios
Hutchings, Frances
Tamadoni, Reza
Walsh, Darren
Turnbull, Mark
Escobedo-Cousin, Enrique
Bailey, Richard G.
Gausden, Johannes
Patel, Aaliyah
Haci, Dorian
Liu, Yan
LeBeau, Fiona E. N.
Trevelyan, Andrew
Constandinou, Timothy G.
O'Neill, Anthony
Kaiser, Marcus
Degenaar, Patrick
Jackson, Andrew
author_facet Firfilionis, Dimitrios
Hutchings, Frances
Tamadoni, Reza
Walsh, Darren
Turnbull, Mark
Escobedo-Cousin, Enrique
Bailey, Richard G.
Gausden, Johannes
Patel, Aaliyah
Haci, Dorian
Liu, Yan
LeBeau, Fiona E. N.
Trevelyan, Andrew
Constandinou, Timothy G.
O'Neill, Anthony
Kaiser, Marcus
Degenaar, Patrick
Jackson, Andrew
author_sort Firfilionis, Dimitrios
collection PubMed
description Neuromodulation is an established treatment for numerous neurological conditions, but to expand the therapeutic scope there is a need to improve the spatial, temporal and cell-type specificity of stimulation. Optogenetics is a promising area of current research, enabling optical stimulation of genetically-defined cell types without interfering with concurrent electrical recording for closed-loop control of neural activity. We are developing an open-source system to provide a platform for closed-loop optogenetic neuromodulation, incorporating custom integrated circuitry for recording and stimulation, real-time closed-loop algorithms running on a microcontroller and experimental control via a PC interface. We include commercial components to validate performance, with the ultimate aim of translating this approach to humans. In the meantime our system is flexible and expandable for use in a variety of preclinical neuroscientific applications. The platform consists of a Controlling Abnormal Network Dynamics using Optogenetics (CANDO) Control System (CS) that interfaces with up to four CANDO headstages responsible for electrical recording and optical stimulation through custom CANDO LED optrodes. Control of the hardware, inbuilt algorithms and data acquisition is enabled via the CANDO GUI (Graphical User Interface). Here we describe the design and implementation of this system, and demonstrate how it can be used to modulate neuronal oscillations in vitro and in vivo.
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spelling pubmed-84622982021-09-25 A Closed-Loop Optogenetic Platform Firfilionis, Dimitrios Hutchings, Frances Tamadoni, Reza Walsh, Darren Turnbull, Mark Escobedo-Cousin, Enrique Bailey, Richard G. Gausden, Johannes Patel, Aaliyah Haci, Dorian Liu, Yan LeBeau, Fiona E. N. Trevelyan, Andrew Constandinou, Timothy G. O'Neill, Anthony Kaiser, Marcus Degenaar, Patrick Jackson, Andrew Front Neurosci Neuroscience Neuromodulation is an established treatment for numerous neurological conditions, but to expand the therapeutic scope there is a need to improve the spatial, temporal and cell-type specificity of stimulation. Optogenetics is a promising area of current research, enabling optical stimulation of genetically-defined cell types without interfering with concurrent electrical recording for closed-loop control of neural activity. We are developing an open-source system to provide a platform for closed-loop optogenetic neuromodulation, incorporating custom integrated circuitry for recording and stimulation, real-time closed-loop algorithms running on a microcontroller and experimental control via a PC interface. We include commercial components to validate performance, with the ultimate aim of translating this approach to humans. In the meantime our system is flexible and expandable for use in a variety of preclinical neuroscientific applications. The platform consists of a Controlling Abnormal Network Dynamics using Optogenetics (CANDO) Control System (CS) that interfaces with up to four CANDO headstages responsible for electrical recording and optical stimulation through custom CANDO LED optrodes. Control of the hardware, inbuilt algorithms and data acquisition is enabled via the CANDO GUI (Graphical User Interface). Here we describe the design and implementation of this system, and demonstrate how it can be used to modulate neuronal oscillations in vitro and in vivo. Frontiers Media S.A. 2021-09-10 /pmc/articles/PMC8462298/ /pubmed/34566564 http://dx.doi.org/10.3389/fnins.2021.718311 Text en Copyright © 2021 Firfilionis, Hutchings, Tamadoni, Walsh, Turnbull, Escobedo-Cousin, Bailey, Gausden, Patel, Haci, Liu, LeBeau, Trevelyan, Constandinou, O'Neill, Kaiser, Degenaar and Jackson. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Neuroscience
Firfilionis, Dimitrios
Hutchings, Frances
Tamadoni, Reza
Walsh, Darren
Turnbull, Mark
Escobedo-Cousin, Enrique
Bailey, Richard G.
Gausden, Johannes
Patel, Aaliyah
Haci, Dorian
Liu, Yan
LeBeau, Fiona E. N.
Trevelyan, Andrew
Constandinou, Timothy G.
O'Neill, Anthony
Kaiser, Marcus
Degenaar, Patrick
Jackson, Andrew
A Closed-Loop Optogenetic Platform
title A Closed-Loop Optogenetic Platform
title_full A Closed-Loop Optogenetic Platform
title_fullStr A Closed-Loop Optogenetic Platform
title_full_unstemmed A Closed-Loop Optogenetic Platform
title_short A Closed-Loop Optogenetic Platform
title_sort closed-loop optogenetic platform
topic Neuroscience
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8462298/
https://www.ncbi.nlm.nih.gov/pubmed/34566564
http://dx.doi.org/10.3389/fnins.2021.718311
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