The complete mitochondrial genome of Asymblepharus himalayanus (Scincidae; Sauria) and its phylogenetic position within Scincidae

The complete mitochondrial genome of Asymblepharus himalayanus, has been determined for the first time by sanger sequencing. The overall length of the mitogenome is 17,304 bp and contains 13 protein-coding genes, 22 transfer RNA genes, 2 ribosomal RNA genes, and a putative control region. The total...

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Autores principales: Weng, Shi-Yang, Huang, Song, Yang, Le, Peng, Li-Fang, Wei, Cong, Li, Jian-Chuan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8462832/
https://www.ncbi.nlm.nih.gov/pubmed/34568573
http://dx.doi.org/10.1080/23802359.2021.1979430
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author Weng, Shi-Yang
Huang, Song
Yang, Le
Peng, Li-Fang
Wei, Cong
Li, Jian-Chuan
author_facet Weng, Shi-Yang
Huang, Song
Yang, Le
Peng, Li-Fang
Wei, Cong
Li, Jian-Chuan
author_sort Weng, Shi-Yang
collection PubMed
description The complete mitochondrial genome of Asymblepharus himalayanus, has been determined for the first time by sanger sequencing. The overall length of the mitogenome is 17,304 bp and contains 13 protein-coding genes, 22 transfer RNA genes, 2 ribosomal RNA genes, and a putative control region. The total base composition is 31.2% for A, 27.0% for T, 14.4% for G, and 27.4% for C. The phylogenetic tree with the whole mitochondrial genome sequence of A. himalayanus together with 10 other related species belonging to the family Scincidae was reconstructed, in order to prove the validity of the mitogenome of A. himalayanus. Phylogenetic analysis indicated that A. himalayanus was not nested within Scincella, and further corroborated this species does not belong to the genus of Scincella.
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spelling pubmed-84628322021-09-25 The complete mitochondrial genome of Asymblepharus himalayanus (Scincidae; Sauria) and its phylogenetic position within Scincidae Weng, Shi-Yang Huang, Song Yang, Le Peng, Li-Fang Wei, Cong Li, Jian-Chuan Mitochondrial DNA B Resour Mitogenome Announcement The complete mitochondrial genome of Asymblepharus himalayanus, has been determined for the first time by sanger sequencing. The overall length of the mitogenome is 17,304 bp and contains 13 protein-coding genes, 22 transfer RNA genes, 2 ribosomal RNA genes, and a putative control region. The total base composition is 31.2% for A, 27.0% for T, 14.4% for G, and 27.4% for C. The phylogenetic tree with the whole mitochondrial genome sequence of A. himalayanus together with 10 other related species belonging to the family Scincidae was reconstructed, in order to prove the validity of the mitogenome of A. himalayanus. Phylogenetic analysis indicated that A. himalayanus was not nested within Scincella, and further corroborated this species does not belong to the genus of Scincella. Taylor & Francis 2021-09-22 /pmc/articles/PMC8462832/ /pubmed/34568573 http://dx.doi.org/10.1080/23802359.2021.1979430 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Weng, Shi-Yang
Huang, Song
Yang, Le
Peng, Li-Fang
Wei, Cong
Li, Jian-Chuan
The complete mitochondrial genome of Asymblepharus himalayanus (Scincidae; Sauria) and its phylogenetic position within Scincidae
title The complete mitochondrial genome of Asymblepharus himalayanus (Scincidae; Sauria) and its phylogenetic position within Scincidae
title_full The complete mitochondrial genome of Asymblepharus himalayanus (Scincidae; Sauria) and its phylogenetic position within Scincidae
title_fullStr The complete mitochondrial genome of Asymblepharus himalayanus (Scincidae; Sauria) and its phylogenetic position within Scincidae
title_full_unstemmed The complete mitochondrial genome of Asymblepharus himalayanus (Scincidae; Sauria) and its phylogenetic position within Scincidae
title_short The complete mitochondrial genome of Asymblepharus himalayanus (Scincidae; Sauria) and its phylogenetic position within Scincidae
title_sort complete mitochondrial genome of asymblepharus himalayanus (scincidae; sauria) and its phylogenetic position within scincidae
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8462832/
https://www.ncbi.nlm.nih.gov/pubmed/34568573
http://dx.doi.org/10.1080/23802359.2021.1979430
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