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The complete chloroplast genome of Camellia semiserrata Chi. (Theaceae), an excellent woody edible oil and landscaping species in South China
Camellia semiserrata is a woody plant that produces excellent edible oil and is a common landscaping species in South China. The complete chloroplast genome of C. semiserrata was sequenced, assembled, annotated, and characterized using the Illumina MiSeq platform in this study. The chloroplast genom...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8462872/ https://www.ncbi.nlm.nih.gov/pubmed/34568567 http://dx.doi.org/10.1080/23802359.2021.1976690 |
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author | Dong, Le Yin, Xin Huang, Bin Li, Tian Huang, Jian Jian Wen, Qiang |
author_facet | Dong, Le Yin, Xin Huang, Bin Li, Tian Huang, Jian Jian Wen, Qiang |
author_sort | Dong, Le |
collection | PubMed |
description | Camellia semiserrata is a woody plant that produces excellent edible oil and is a common landscaping species in South China. The complete chloroplast genome of C. semiserrata was sequenced, assembled, annotated, and characterized using the Illumina MiSeq platform in this study. The chloroplast genome is 156,968 bp (37.32% GC) and contains a large single copy (LSC) region (86,634 bp), a small single copy (SSC) region (18,272 bp), and a pair of inverted repeat (IR) regions (26,031 bp). It encodes a total of 117 genes, including 81 protein-coding genes, four ribosomal RNA genes, and 32 transfer RNA genes. The phylogenetic tree fully resolved C. semiserrata in a clade with C. reticulata, C. mairei, and C. pitardii. This study contributes to bioinformatics and further phylogeny and conservation studies as well as provides a theoretical basis for the molecular identification of C. semiserrata. |
format | Online Article Text |
id | pubmed-8462872 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-84628722021-09-25 The complete chloroplast genome of Camellia semiserrata Chi. (Theaceae), an excellent woody edible oil and landscaping species in South China Dong, Le Yin, Xin Huang, Bin Li, Tian Huang, Jian Jian Wen, Qiang Mitochondrial DNA B Resour Mitogenome Announcement Camellia semiserrata is a woody plant that produces excellent edible oil and is a common landscaping species in South China. The complete chloroplast genome of C. semiserrata was sequenced, assembled, annotated, and characterized using the Illumina MiSeq platform in this study. The chloroplast genome is 156,968 bp (37.32% GC) and contains a large single copy (LSC) region (86,634 bp), a small single copy (SSC) region (18,272 bp), and a pair of inverted repeat (IR) regions (26,031 bp). It encodes a total of 117 genes, including 81 protein-coding genes, four ribosomal RNA genes, and 32 transfer RNA genes. The phylogenetic tree fully resolved C. semiserrata in a clade with C. reticulata, C. mairei, and C. pitardii. This study contributes to bioinformatics and further phylogeny and conservation studies as well as provides a theoretical basis for the molecular identification of C. semiserrata. Taylor & Francis 2021-09-22 /pmc/articles/PMC8462872/ /pubmed/34568567 http://dx.doi.org/10.1080/23802359.2021.1976690 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Dong, Le Yin, Xin Huang, Bin Li, Tian Huang, Jian Jian Wen, Qiang The complete chloroplast genome of Camellia semiserrata Chi. (Theaceae), an excellent woody edible oil and landscaping species in South China |
title | The complete chloroplast genome of Camellia semiserrata Chi. (Theaceae), an excellent woody edible oil and landscaping species in South China |
title_full | The complete chloroplast genome of Camellia semiserrata Chi. (Theaceae), an excellent woody edible oil and landscaping species in South China |
title_fullStr | The complete chloroplast genome of Camellia semiserrata Chi. (Theaceae), an excellent woody edible oil and landscaping species in South China |
title_full_unstemmed | The complete chloroplast genome of Camellia semiserrata Chi. (Theaceae), an excellent woody edible oil and landscaping species in South China |
title_short | The complete chloroplast genome of Camellia semiserrata Chi. (Theaceae), an excellent woody edible oil and landscaping species in South China |
title_sort | complete chloroplast genome of camellia semiserrata chi. (theaceae), an excellent woody edible oil and landscaping species in south china |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8462872/ https://www.ncbi.nlm.nih.gov/pubmed/34568567 http://dx.doi.org/10.1080/23802359.2021.1976690 |
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