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Capturing spike train temporal pattern with wavelet average coefficient for brain machine interface
Motor brain machine interfaces (BMIs) directly link the brain to artificial actuators and have the potential to mitigate severe body paralysis caused by neurological injury or disease. Most BMI systems involve a decoder that analyzes neural spike counts to infer movement intent. However, many classi...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8463672/ https://www.ncbi.nlm.nih.gov/pubmed/34561503 http://dx.doi.org/10.1038/s41598-021-98578-5 |
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author | Wen, Shixian Yin, Allen Tseng, Po-He Itti, Laurent Lebedev, Mikhail A. Nicolelis, Miguel |
author_facet | Wen, Shixian Yin, Allen Tseng, Po-He Itti, Laurent Lebedev, Mikhail A. Nicolelis, Miguel |
author_sort | Wen, Shixian |
collection | PubMed |
description | Motor brain machine interfaces (BMIs) directly link the brain to artificial actuators and have the potential to mitigate severe body paralysis caused by neurological injury or disease. Most BMI systems involve a decoder that analyzes neural spike counts to infer movement intent. However, many classical BMI decoders (1) fail to take advantage of temporal patterns of spike trains, possibly over long time horizons; (2) are insufficient to achieve good BMI performance at high temporal resolution, as the underlying Gaussian assumption of decoders based on spike counts is violated. Here, we propose a new statistical feature that represents temporal patterns or temporal codes of spike events with richer description—wavelet average coefficients (WAC)—to be used as decoder input instead of spike counts. We constructed a wavelet decoder framework by using WAC features with a sliding-window approach, and compared the resulting decoder against classical decoders (Wiener and Kalman family) and new deep learning based decoders ( Long Short-Term Memory) using spike count features. We found that the sliding-window approach boosts decoding temporal resolution, and using WAC features significantly improves decoding performance over using spike count features. |
format | Online Article Text |
id | pubmed-8463672 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-84636722021-09-29 Capturing spike train temporal pattern with wavelet average coefficient for brain machine interface Wen, Shixian Yin, Allen Tseng, Po-He Itti, Laurent Lebedev, Mikhail A. Nicolelis, Miguel Sci Rep Article Motor brain machine interfaces (BMIs) directly link the brain to artificial actuators and have the potential to mitigate severe body paralysis caused by neurological injury or disease. Most BMI systems involve a decoder that analyzes neural spike counts to infer movement intent. However, many classical BMI decoders (1) fail to take advantage of temporal patterns of spike trains, possibly over long time horizons; (2) are insufficient to achieve good BMI performance at high temporal resolution, as the underlying Gaussian assumption of decoders based on spike counts is violated. Here, we propose a new statistical feature that represents temporal patterns or temporal codes of spike events with richer description—wavelet average coefficients (WAC)—to be used as decoder input instead of spike counts. We constructed a wavelet decoder framework by using WAC features with a sliding-window approach, and compared the resulting decoder against classical decoders (Wiener and Kalman family) and new deep learning based decoders ( Long Short-Term Memory) using spike count features. We found that the sliding-window approach boosts decoding temporal resolution, and using WAC features significantly improves decoding performance over using spike count features. Nature Publishing Group UK 2021-09-24 /pmc/articles/PMC8463672/ /pubmed/34561503 http://dx.doi.org/10.1038/s41598-021-98578-5 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Wen, Shixian Yin, Allen Tseng, Po-He Itti, Laurent Lebedev, Mikhail A. Nicolelis, Miguel Capturing spike train temporal pattern with wavelet average coefficient for brain machine interface |
title | Capturing spike train temporal pattern with wavelet average coefficient for brain machine interface |
title_full | Capturing spike train temporal pattern with wavelet average coefficient for brain machine interface |
title_fullStr | Capturing spike train temporal pattern with wavelet average coefficient for brain machine interface |
title_full_unstemmed | Capturing spike train temporal pattern with wavelet average coefficient for brain machine interface |
title_short | Capturing spike train temporal pattern with wavelet average coefficient for brain machine interface |
title_sort | capturing spike train temporal pattern with wavelet average coefficient for brain machine interface |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8463672/ https://www.ncbi.nlm.nih.gov/pubmed/34561503 http://dx.doi.org/10.1038/s41598-021-98578-5 |
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