Cargando…

AC-motif: a DNA motif containing adenine and cytosine repeat plays a role in gene regulation

I-motif or C4 is a four-stranded DNA structure with a protonated cytosine:cytosine base pair (C+:C) found in cytosine-rich sequences. We have found that oligodeoxynucleotides containing adenine and cytosine repeats form a stable secondary structure at a physiological pH with magnesium ion, which is...

Descripción completa

Detalles Bibliográficos
Autores principales:	Hur, Jeong Hwan, Kang, Chan Young, Lee, Sungjin, Parveen, Nazia, Yu, Jihyeon, Shamim, Amen, Yoo, Wanki, Ghosh, Ambarnil, Bae, Sangsu, Park, Chin-Ju, Kim, Kyeong Kyu
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Oxford University Press 2021
Materias:	Structural Biology
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8464069/ https://www.ncbi.nlm.nih.gov/pubmed/34469538 http://dx.doi.org/10.1093/nar/gkab728

Ejemplares similares

E-motif formed by extrahelical cytosine bases in DNA homoduplexes of trinucleotide and hexanucleotide repeats
por: Pan, Feng, et al.
Publicado: (2018)

The effect of hairpin loop on the structure and gene expression activity of the long-loop G-quadruplex
por: Ravichandran, Subramaniyam, et al.
Publicado: (2021)

Distinctive structural motifs of RNA G-quadruplexes composed of AGG, CGG and UGG trinucleotide repeats
por: Malgowska, Magdalena, et al.
Publicado: (2014)

The PNA–DNA hybrid I-motif: implications for sugar–sugar contacts in i-motif tetramerization
por: Modi, Souvik, et al.
Publicado: (2006)

The k-junction motif in RNA structure
por: Wang, Jia, et al.
Publicado: (2014)

MD-TSPC4: Computational Method for Predicting the Thermal Stability of I-Motif
por: Shamim, Amen, et al.
Publicado: (2020)

Modeling RNA tertiary structure motifs by graph-grammars
por: St-Onge, Karine, et al.
Publicado: (2007)

Junctions between i-motif tetramers in supramolecular structures
por: Guittet, Eric, et al.
Publicado: (2012)

A DNA G-quadruplex/i-motif hybrid
por: Chu, Betty, et al.
Publicado: (2019)

Epigenetic modification of cytosines fine tunes the stability of i-motif DNA
por: Wright, Elisé P, et al.
Publicado: (2020)

Recurrent RNA motifs as probes for studying RNA-protein interactions in the ribosome
por: Gagnon, Matthieu G., et al.
Publicado: (2010)

Mobile modules and motifs
por: Bork, Peer
Publicado: (1992)

Zn(2+) selectively stabilizes FdU-substituted DNA through a unique major groove binding motif
por: Ghosh, Supratim, et al.
Publicado: (2011)

Correction to ‘The effect of hairpin loop on the structure and gene expression activity of the long-loop G-quadruplex’
por: Ravichandran, Subramaniyam, et al.
Publicado: (2021)

The Truncated C-terminal RNA Recognition Motif of TDP-43 Protein Plays a Key Role in Forming Proteinaceous Aggregates
por: Wang, Yi-Ting, et al.
Publicado: (2013)

The androgen receptor cytosine-adenine-guanine repeat length contributes to the development of epithelial ovarian cancer
por: Meng, Xiangrui, et al.
Publicado: (2015)

The phosphate clamp: a small and independent motif for nucleic acid backbone recognition
por: Komeda, Seiji, et al.
Publicado: (2011)

A minimal i-motif stabilized by minor groove G:T:G:T tetrads
por: Escaja, Núria, et al.
Publicado: (2012)

Structural basis of UCUU RNA motif recognition by splicing factor RBM20
por: Upadhyay, Santosh Kumar, et al.
Publicado: (2020)

Orchestrating serine/threonine phosphorylation and elucidating downstream effects by short linear motifs
por: Kliche, Johanna, et al.
Publicado: (2022)

DNA i-motif formation at neutral pH is driven by kinetic partitioning
por: Školáková, Petra, et al.
Publicado: (2023)

Flavin Adenine Dinucleotide Structural Motifs: From Solution to Gas Phase
por: Molano-Arevalo, Juan Camilo, et al.
Publicado: (2014)

CGGBP1-regulated cytosine methylation at CTCF-binding motifs resists stochasticity
por: Patel, Manthan, et al.
Publicado: (2020)

[C(7)GC(4)](4) Association into supra molecular i-motif structures
por: Laisné, Aude, et al.
Publicado: (2010)

Intra-locked G-quadruplex structures formed by irregular DNA G-rich motifs
por: Maity, Arijit, et al.
Publicado: (2020)

Structural basis for specific DNA sequence motif recognition by the TFAP2 transcription factors
por: Liu, Ke, et al.
Publicado: (2023)

BusR senses bipartite DNA binding motifs by a unique molecular ruler architecture
por: Bandera, Adrian M, et al.
Publicado: (2021)

Raman and Raman optical activity (ROA) analysis of RNA structural motifs in Domain I of the EMCV IRES
por: Hobro, Alison J., et al.
Publicado: (2007)

Spacing between core recognition motifs determines relative orientation of AraR monomers on bipartite operators
por: Jain, Deepti, et al.
Publicado: (2013)

Duplex stem-loop-containing quadruplex motifs in the human genome: a combined genomic and structural study
por: Lim, Kah Wai, et al.
Publicado: (2015)

Sequence-specific DNA binding activity of the cross-brace zinc finger motif of the piggyBac transposase
por: Morellet, Nelly, et al.
Publicado: (2018)

A structurally conserved motif in γ-herpesvirus uracil-DNA glycosylases elicits duplex nucleotide-flipping
por: Earl, Christopher, et al.
Publicado: (2018)

Several structural motifs cooperate in determining the highly effective anti-thrombin activity of NU172 aptamer
por: Troisi, Romualdo, et al.
Publicado: (2018)

Context-sensitivity of isosteric substitutions of non-Watson–Crick basepairs in recurrent RNA 3D motifs
por: Khisamutdinov, Emil F, et al.
Publicado: (2021)

Targeting fidelity of adenine and cytosine base editors in mouse embryos
por: Lee, Hye Kyung, et al.
Publicado: (2018)

Examination of the Cell Cycle Dependence of Cytosine and Adenine Base Editors
por: Burnett, Cameron A., et al.
Publicado: (2022)

Estrogen Receptor-β Gene Cytosine-Adenine (ESR2-CA) Repeat Polymorphism in Postmenopausal Colon Cancer
por: Honma, Naoko, et al.
Publicado: (2023)

RSMD-repeat searcher and motif detector
por: Mani, Udayakumar, et al.
Publicado: (2014)

Structure and hydrodynamics of a DNA G-quadruplex with a cytosine bulge
por: Meier, Markus, et al.
Publicado: (2018)

Intramolecularly folded G-quadruplex and i-motif structures in the proximal promoter of the vascular endothelial growth factor gene
por: Guo, Kexiao, et al.
Publicado: (2008)

Cannot write session to /tmp/vufind_sessions/sess_aj583demt2jbgbkq8sqmg991v0