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Fast Fabrication of Solid-State Nanopores for DNA Molecule Analysis
Solid-state nanopores have been developed as a prominent tool for single molecule analysis in versatile applications. Although controlled dielectric breakdown (CDB) is the most accessible method for a single nanopore fabrication, it is still necessary to improve the fabrication efficiency and avoid...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8468320/ https://www.ncbi.nlm.nih.gov/pubmed/34578767 http://dx.doi.org/10.3390/nano11092450 |
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author | Zhang, Yin Ma, Dexian Gu, Zengdao Zhan, Lijian Sha, Jingjie |
author_facet | Zhang, Yin Ma, Dexian Gu, Zengdao Zhan, Lijian Sha, Jingjie |
author_sort | Zhang, Yin |
collection | PubMed |
description | Solid-state nanopores have been developed as a prominent tool for single molecule analysis in versatile applications. Although controlled dielectric breakdown (CDB) is the most accessible method for a single nanopore fabrication, it is still necessary to improve the fabrication efficiency and avoid the generation of multiple nanopores. In this work, we treated the SiNx membranes in the air–plasma before the CDB process, which shortened the time-to-pore-formation by orders of magnitude. λ-DNA translocation experiments validated the functionality of the pore and substantiated the presence of only a single pore on the membrane. Our fabricated pore could also be successfully used to detect short single-stranded DNA (ssDNA) fragments. Using to ionic current signals, ssDNA fragments with different lengths could be clearly distinguished. These results will provide a valuable reference for the nanopore fabrication and DNA analysis. |
format | Online Article Text |
id | pubmed-8468320 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-84683202021-09-27 Fast Fabrication of Solid-State Nanopores for DNA Molecule Analysis Zhang, Yin Ma, Dexian Gu, Zengdao Zhan, Lijian Sha, Jingjie Nanomaterials (Basel) Article Solid-state nanopores have been developed as a prominent tool for single molecule analysis in versatile applications. Although controlled dielectric breakdown (CDB) is the most accessible method for a single nanopore fabrication, it is still necessary to improve the fabrication efficiency and avoid the generation of multiple nanopores. In this work, we treated the SiNx membranes in the air–plasma before the CDB process, which shortened the time-to-pore-formation by orders of magnitude. λ-DNA translocation experiments validated the functionality of the pore and substantiated the presence of only a single pore on the membrane. Our fabricated pore could also be successfully used to detect short single-stranded DNA (ssDNA) fragments. Using to ionic current signals, ssDNA fragments with different lengths could be clearly distinguished. These results will provide a valuable reference for the nanopore fabrication and DNA analysis. MDPI 2021-09-20 /pmc/articles/PMC8468320/ /pubmed/34578767 http://dx.doi.org/10.3390/nano11092450 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Zhang, Yin Ma, Dexian Gu, Zengdao Zhan, Lijian Sha, Jingjie Fast Fabrication of Solid-State Nanopores for DNA Molecule Analysis |
title | Fast Fabrication of Solid-State Nanopores for DNA Molecule Analysis |
title_full | Fast Fabrication of Solid-State Nanopores for DNA Molecule Analysis |
title_fullStr | Fast Fabrication of Solid-State Nanopores for DNA Molecule Analysis |
title_full_unstemmed | Fast Fabrication of Solid-State Nanopores for DNA Molecule Analysis |
title_short | Fast Fabrication of Solid-State Nanopores for DNA Molecule Analysis |
title_sort | fast fabrication of solid-state nanopores for dna molecule analysis |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8468320/ https://www.ncbi.nlm.nih.gov/pubmed/34578767 http://dx.doi.org/10.3390/nano11092450 |
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