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Identification and Engineering of Aptamers for Theranostic Application in Human Health and Disorders

An aptamer is a short sequence of synthetic oligonucleotides which bind to their cognate target, specifically while maintaining similar or higher sensitivity compared to an antibody. The in-vitro selection of an aptamer, applying a conjoining approach of chemistry and molecular biology, is referred...

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Autores principales: Basu, Debleena, Chakraborty, Sourabrata, Pal, Riddhi, Sharma, Tarun Kumar, Sarkar, Siddik
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8469434/
https://www.ncbi.nlm.nih.gov/pubmed/34575825
http://dx.doi.org/10.3390/ijms22189661
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author Basu, Debleena
Chakraborty, Sourabrata
Pal, Riddhi
Sharma, Tarun Kumar
Sarkar, Siddik
author_facet Basu, Debleena
Chakraborty, Sourabrata
Pal, Riddhi
Sharma, Tarun Kumar
Sarkar, Siddik
author_sort Basu, Debleena
collection PubMed
description An aptamer is a short sequence of synthetic oligonucleotides which bind to their cognate target, specifically while maintaining similar or higher sensitivity compared to an antibody. The in-vitro selection of an aptamer, applying a conjoining approach of chemistry and molecular biology, is referred as Systematic Evolution of Ligands by Exponential enrichment (SELEX). These initial products of SELEX are further modified chemically in an attempt to make them stable in biofluid, avoiding nuclease digestion and renal clearance. While the modification is incorporated, enough care should be taken to maintain its sensitivity and specificity. These modifications and several improvisations have widened the window frame of aptamer applications that are currently not only restricted to in-vitro systems, but have also been used in molecular imaging for disease pathology and treatment. In the food industry, it has been used as sensor for detection of different diseases and fungal infections. In this review, we have discussed a brief history of its journey, along with applications where its role as a therapeutic plus diagnostic (theranostic) tool has been demonstrated. We have also highlighted the potential aptamer-mediated strategies for molecular targeting of COVID-19. Finally, the review focused on its future prospective in immunotherapy, as well as in identification of novel biomarkers in stem cells and also in single cell proteomics (scProteomics) to study intra or inter-tumor heterogeneity at the protein level. Small size, chemical synthesis, low batch variation, cost effectiveness, long shelf life and low immunogenicity provide advantages to the aptamer over the antibody. These physical and chemical properties of aptamers render them as a strong biomedical tool for theranostic purposes over the existing ones. The significance of aptamers in human health was the key finding of this review.
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spelling pubmed-84694342021-09-27 Identification and Engineering of Aptamers for Theranostic Application in Human Health and Disorders Basu, Debleena Chakraborty, Sourabrata Pal, Riddhi Sharma, Tarun Kumar Sarkar, Siddik Int J Mol Sci Review An aptamer is a short sequence of synthetic oligonucleotides which bind to their cognate target, specifically while maintaining similar or higher sensitivity compared to an antibody. The in-vitro selection of an aptamer, applying a conjoining approach of chemistry and molecular biology, is referred as Systematic Evolution of Ligands by Exponential enrichment (SELEX). These initial products of SELEX are further modified chemically in an attempt to make them stable in biofluid, avoiding nuclease digestion and renal clearance. While the modification is incorporated, enough care should be taken to maintain its sensitivity and specificity. These modifications and several improvisations have widened the window frame of aptamer applications that are currently not only restricted to in-vitro systems, but have also been used in molecular imaging for disease pathology and treatment. In the food industry, it has been used as sensor for detection of different diseases and fungal infections. In this review, we have discussed a brief history of its journey, along with applications where its role as a therapeutic plus diagnostic (theranostic) tool has been demonstrated. We have also highlighted the potential aptamer-mediated strategies for molecular targeting of COVID-19. Finally, the review focused on its future prospective in immunotherapy, as well as in identification of novel biomarkers in stem cells and also in single cell proteomics (scProteomics) to study intra or inter-tumor heterogeneity at the protein level. Small size, chemical synthesis, low batch variation, cost effectiveness, long shelf life and low immunogenicity provide advantages to the aptamer over the antibody. These physical and chemical properties of aptamers render them as a strong biomedical tool for theranostic purposes over the existing ones. The significance of aptamers in human health was the key finding of this review. MDPI 2021-09-07 /pmc/articles/PMC8469434/ /pubmed/34575825 http://dx.doi.org/10.3390/ijms22189661 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Review
Basu, Debleena
Chakraborty, Sourabrata
Pal, Riddhi
Sharma, Tarun Kumar
Sarkar, Siddik
Identification and Engineering of Aptamers for Theranostic Application in Human Health and Disorders
title Identification and Engineering of Aptamers for Theranostic Application in Human Health and Disorders
title_full Identification and Engineering of Aptamers for Theranostic Application in Human Health and Disorders
title_fullStr Identification and Engineering of Aptamers for Theranostic Application in Human Health and Disorders
title_full_unstemmed Identification and Engineering of Aptamers for Theranostic Application in Human Health and Disorders
title_short Identification and Engineering of Aptamers for Theranostic Application in Human Health and Disorders
title_sort identification and engineering of aptamers for theranostic application in human health and disorders
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8469434/
https://www.ncbi.nlm.nih.gov/pubmed/34575825
http://dx.doi.org/10.3390/ijms22189661
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