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OXA-900, a Novel OXA Sub-Family Carbapenemase Identified in Citrobacter freundii, Evades Detection by Commercial Molecular Diagnostics Tests

Using whole-genome sequencing and cloning of the target gene, we identified bla(OXA-900) carbapenemase, a novel bla(OXA) belonging to a distant and distinct sub-family of bla(OXA-48-like). The plasmid-mediated gene was identified in a C. freundii isolate with elevated carbapenem MICs that evaded det...

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Autores principales: Frenk, Sammy, Rakovitsky, Nadya, Kon, Hadas, Rov, Reut, Abramov, Shirin, Lurie-Weinberger, Mor Nadia, Schwartz, David, Pinco, Erica, Lellouche, Jonathan, Carmeli, Yehuda
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8469585/
https://www.ncbi.nlm.nih.gov/pubmed/34576793
http://dx.doi.org/10.3390/microorganisms9091898
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author Frenk, Sammy
Rakovitsky, Nadya
Kon, Hadas
Rov, Reut
Abramov, Shirin
Lurie-Weinberger, Mor Nadia
Schwartz, David
Pinco, Erica
Lellouche, Jonathan
Carmeli, Yehuda
author_facet Frenk, Sammy
Rakovitsky, Nadya
Kon, Hadas
Rov, Reut
Abramov, Shirin
Lurie-Weinberger, Mor Nadia
Schwartz, David
Pinco, Erica
Lellouche, Jonathan
Carmeli, Yehuda
author_sort Frenk, Sammy
collection PubMed
description Using whole-genome sequencing and cloning of the target gene, we identified bla(OXA-900) carbapenemase, a novel bla(OXA) belonging to a distant and distinct sub-family of bla(OXA-48-like). The plasmid-mediated gene was identified in a C. freundii isolate with elevated carbapenem MICs that evaded detection by commercial DNA-based methods. The novel gene, an OXA-48 family carbapenem-hydrolyzing class D β-lactamase, OXA-900, likely originates from marine environmental Shewanella. Since this plasmid-mediated gene has entered a member of the Enterobacterales and evades detection by commonly used tests, it may gain wide dissemination among Enterobacterales.
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spelling pubmed-84695852021-09-27 OXA-900, a Novel OXA Sub-Family Carbapenemase Identified in Citrobacter freundii, Evades Detection by Commercial Molecular Diagnostics Tests Frenk, Sammy Rakovitsky, Nadya Kon, Hadas Rov, Reut Abramov, Shirin Lurie-Weinberger, Mor Nadia Schwartz, David Pinco, Erica Lellouche, Jonathan Carmeli, Yehuda Microorganisms Article Using whole-genome sequencing and cloning of the target gene, we identified bla(OXA-900) carbapenemase, a novel bla(OXA) belonging to a distant and distinct sub-family of bla(OXA-48-like). The plasmid-mediated gene was identified in a C. freundii isolate with elevated carbapenem MICs that evaded detection by commercial DNA-based methods. The novel gene, an OXA-48 family carbapenem-hydrolyzing class D β-lactamase, OXA-900, likely originates from marine environmental Shewanella. Since this plasmid-mediated gene has entered a member of the Enterobacterales and evades detection by commonly used tests, it may gain wide dissemination among Enterobacterales. MDPI 2021-09-07 /pmc/articles/PMC8469585/ /pubmed/34576793 http://dx.doi.org/10.3390/microorganisms9091898 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Frenk, Sammy
Rakovitsky, Nadya
Kon, Hadas
Rov, Reut
Abramov, Shirin
Lurie-Weinberger, Mor Nadia
Schwartz, David
Pinco, Erica
Lellouche, Jonathan
Carmeli, Yehuda
OXA-900, a Novel OXA Sub-Family Carbapenemase Identified in Citrobacter freundii, Evades Detection by Commercial Molecular Diagnostics Tests
title OXA-900, a Novel OXA Sub-Family Carbapenemase Identified in Citrobacter freundii, Evades Detection by Commercial Molecular Diagnostics Tests
title_full OXA-900, a Novel OXA Sub-Family Carbapenemase Identified in Citrobacter freundii, Evades Detection by Commercial Molecular Diagnostics Tests
title_fullStr OXA-900, a Novel OXA Sub-Family Carbapenemase Identified in Citrobacter freundii, Evades Detection by Commercial Molecular Diagnostics Tests
title_full_unstemmed OXA-900, a Novel OXA Sub-Family Carbapenemase Identified in Citrobacter freundii, Evades Detection by Commercial Molecular Diagnostics Tests
title_short OXA-900, a Novel OXA Sub-Family Carbapenemase Identified in Citrobacter freundii, Evades Detection by Commercial Molecular Diagnostics Tests
title_sort oxa-900, a novel oxa sub-family carbapenemase identified in citrobacter freundii, evades detection by commercial molecular diagnostics tests
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8469585/
https://www.ncbi.nlm.nih.gov/pubmed/34576793
http://dx.doi.org/10.3390/microorganisms9091898
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