Cargando…

Transcriptomic Characterization of Odorant Binding Proteins in Cacia cretifera thibetana and Their Association with Different Host Emitted Volatiles

SIMPLE SUMMARY: The odorant binding proteins (OBPs) interact with host chemical compounds to elicit olfactory responses. Transcriptome analysis of six different tissues of male and female Cacia cretifera thibetana was performed to unravel the interaction of OBPs with host compounds. In both sexes, d...

Descripción completa

Detalles Bibliográficos
Autores principales: Zhao, Ning, Mao, Xiangzhong, Liu, Naiyong, Liu, Ling, Zhang, Zhixiao, Ze, Sangzi, Yang, Bin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8469897/
https://www.ncbi.nlm.nih.gov/pubmed/34564227
http://dx.doi.org/10.3390/insects12090787
_version_ 1784574057538125824
author Zhao, Ning
Mao, Xiangzhong
Liu, Naiyong
Liu, Ling
Zhang, Zhixiao
Ze, Sangzi
Yang, Bin
author_facet Zhao, Ning
Mao, Xiangzhong
Liu, Naiyong
Liu, Ling
Zhang, Zhixiao
Ze, Sangzi
Yang, Bin
author_sort Zhao, Ning
collection PubMed
description SIMPLE SUMMARY: The odorant binding proteins (OBPs) interact with host chemical compounds to elicit olfactory responses. Transcriptome analysis of six different tissues of male and female Cacia cretifera thibetana was performed to unravel the interaction of OBPs with host compounds. In both sexes, differentially expressed genes were associated with the KEGG pathways such as cutin, suberine and wax biosynthesis, glycerophospholipid metabolism, choline metabolism in cancer, and the chemokine signaling pathway. The expression of 11 out of 31 OBPs were confirmed by quantitative RT-PCR and seven were found to be specifically expressed in antennae. CcreOBP6 and CcreOBP10 showed strong affinity for terpineol and trans-2-hexenal exhibiting their potential role as an attractant or repellent to control C. cretifera thibetana. ABSTRACT: This study characterized the transcriptome of Cacia cretifera thibetana and explored odorant binding proteins (OBPs) and their interaction with host-specific compounds. A total of 36 samples from six different organs including antennae, head, thorax, abdomen, wings, and legs (12 groups with 3 replicates per group) from both male and female insects were collected for RNA extraction. Transcriptomic analysis revealed a total of 89,897 transcripts as unigenes, with an average length of 1036 bp. Between male and female groups, 31,095 transcripts were identified as differentially expressed genes (DEGs). The KEGG pathway analysis revealed 26 DEGs associated with cutin, suberine, and wax biosynthesis and 70, 48, and 62 were linked to glycerophospholipid metabolism, choline metabolism in cancer, and chemokine signaling pathways, respectively. A total of 31 OBP genes were identified. Among them, the relative expression of 11 OBP genes (OBP6, 10, 12, 14, 17, 20, 22, 26, 28, 30, and 31) was confirmed by quantitative RT-PCR in different tissues. Seven OBP genes including CcreOBP6 and CcreOBP10 revealed antennae-specific expression. Further, we selected two OBPs (CcreOBP6 and CcreOBP10) for functional analysis to evaluate their binding affinity with 20 host odorant compounds. The CcreOBP6 and CcreOBP10 exhibited strong binding affinities with terpineol and trans-2-hexenal revealing their potential as an attractant or repellent for controlling C. cretifera thibetana.
format Online
Article
Text
id pubmed-8469897
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-84698972021-09-27 Transcriptomic Characterization of Odorant Binding Proteins in Cacia cretifera thibetana and Their Association with Different Host Emitted Volatiles Zhao, Ning Mao, Xiangzhong Liu, Naiyong Liu, Ling Zhang, Zhixiao Ze, Sangzi Yang, Bin Insects Article SIMPLE SUMMARY: The odorant binding proteins (OBPs) interact with host chemical compounds to elicit olfactory responses. Transcriptome analysis of six different tissues of male and female Cacia cretifera thibetana was performed to unravel the interaction of OBPs with host compounds. In both sexes, differentially expressed genes were associated with the KEGG pathways such as cutin, suberine and wax biosynthesis, glycerophospholipid metabolism, choline metabolism in cancer, and the chemokine signaling pathway. The expression of 11 out of 31 OBPs were confirmed by quantitative RT-PCR and seven were found to be specifically expressed in antennae. CcreOBP6 and CcreOBP10 showed strong affinity for terpineol and trans-2-hexenal exhibiting their potential role as an attractant or repellent to control C. cretifera thibetana. ABSTRACT: This study characterized the transcriptome of Cacia cretifera thibetana and explored odorant binding proteins (OBPs) and their interaction with host-specific compounds. A total of 36 samples from six different organs including antennae, head, thorax, abdomen, wings, and legs (12 groups with 3 replicates per group) from both male and female insects were collected for RNA extraction. Transcriptomic analysis revealed a total of 89,897 transcripts as unigenes, with an average length of 1036 bp. Between male and female groups, 31,095 transcripts were identified as differentially expressed genes (DEGs). The KEGG pathway analysis revealed 26 DEGs associated with cutin, suberine, and wax biosynthesis and 70, 48, and 62 were linked to glycerophospholipid metabolism, choline metabolism in cancer, and chemokine signaling pathways, respectively. A total of 31 OBP genes were identified. Among them, the relative expression of 11 OBP genes (OBP6, 10, 12, 14, 17, 20, 22, 26, 28, 30, and 31) was confirmed by quantitative RT-PCR in different tissues. Seven OBP genes including CcreOBP6 and CcreOBP10 revealed antennae-specific expression. Further, we selected two OBPs (CcreOBP6 and CcreOBP10) for functional analysis to evaluate their binding affinity with 20 host odorant compounds. The CcreOBP6 and CcreOBP10 exhibited strong binding affinities with terpineol and trans-2-hexenal revealing their potential as an attractant or repellent for controlling C. cretifera thibetana. MDPI 2021-09-03 /pmc/articles/PMC8469897/ /pubmed/34564227 http://dx.doi.org/10.3390/insects12090787 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Zhao, Ning
Mao, Xiangzhong
Liu, Naiyong
Liu, Ling
Zhang, Zhixiao
Ze, Sangzi
Yang, Bin
Transcriptomic Characterization of Odorant Binding Proteins in Cacia cretifera thibetana and Their Association with Different Host Emitted Volatiles
title Transcriptomic Characterization of Odorant Binding Proteins in Cacia cretifera thibetana and Their Association with Different Host Emitted Volatiles
title_full Transcriptomic Characterization of Odorant Binding Proteins in Cacia cretifera thibetana and Their Association with Different Host Emitted Volatiles
title_fullStr Transcriptomic Characterization of Odorant Binding Proteins in Cacia cretifera thibetana and Their Association with Different Host Emitted Volatiles
title_full_unstemmed Transcriptomic Characterization of Odorant Binding Proteins in Cacia cretifera thibetana and Their Association with Different Host Emitted Volatiles
title_short Transcriptomic Characterization of Odorant Binding Proteins in Cacia cretifera thibetana and Their Association with Different Host Emitted Volatiles
title_sort transcriptomic characterization of odorant binding proteins in cacia cretifera thibetana and their association with different host emitted volatiles
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8469897/
https://www.ncbi.nlm.nih.gov/pubmed/34564227
http://dx.doi.org/10.3390/insects12090787
work_keys_str_mv AT zhaoning transcriptomiccharacterizationofodorantbindingproteinsincaciacretiferathibetanaandtheirassociationwithdifferenthostemittedvolatiles
AT maoxiangzhong transcriptomiccharacterizationofodorantbindingproteinsincaciacretiferathibetanaandtheirassociationwithdifferenthostemittedvolatiles
AT liunaiyong transcriptomiccharacterizationofodorantbindingproteinsincaciacretiferathibetanaandtheirassociationwithdifferenthostemittedvolatiles
AT liuling transcriptomiccharacterizationofodorantbindingproteinsincaciacretiferathibetanaandtheirassociationwithdifferenthostemittedvolatiles
AT zhangzhixiao transcriptomiccharacterizationofodorantbindingproteinsincaciacretiferathibetanaandtheirassociationwithdifferenthostemittedvolatiles
AT zesangzi transcriptomiccharacterizationofodorantbindingproteinsincaciacretiferathibetanaandtheirassociationwithdifferenthostemittedvolatiles
AT yangbin transcriptomiccharacterizationofodorantbindingproteinsincaciacretiferathibetanaandtheirassociationwithdifferenthostemittedvolatiles