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CSGBBNet: An Explainable Deep Learning Framework for COVID-19 Detection

The COVID-19 virus has swept the world and brought great impact to various fields, gaining wide attention from all walks of life since the end of 2019. At present, although the global epidemic situation is leveling off and vaccine doses have been administered in a large amount, confirmed cases are s...

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Autores principales: Yao, Xu-Jing, Zhu, Zi-Quan, Wang, Shui-Hua, Zhang, Yu-Dong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8470460/
https://www.ncbi.nlm.nih.gov/pubmed/34574053
http://dx.doi.org/10.3390/diagnostics11091712
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author Yao, Xu-Jing
Zhu, Zi-Quan
Wang, Shui-Hua
Zhang, Yu-Dong
author_facet Yao, Xu-Jing
Zhu, Zi-Quan
Wang, Shui-Hua
Zhang, Yu-Dong
author_sort Yao, Xu-Jing
collection PubMed
description The COVID-19 virus has swept the world and brought great impact to various fields, gaining wide attention from all walks of life since the end of 2019. At present, although the global epidemic situation is leveling off and vaccine doses have been administered in a large amount, confirmed cases are still emerging around the world. To make up for the missed diagnosis caused by the uncertainty of nucleic acid polymerase chain reaction (PCR) test, utilizing lung CT examination as a combined detection method to improve the diagnostic rate becomes a necessity. Our research considered the time-consuming and labor-intensive characteristics of the traditional CT analyzing process, and developed an efficient deep learning framework named CSGBBNet to solve the binary classification task of COVID-19 images based on a COVID-Seg model for image preprocessing and a GBBNet for classification. The five runs with random seed on the test set showed our novel framework can rapidly analyze CT scan images and give out effective results for assisting COVID-19 detection, with the mean accuracy of 98.49 ± 1.23%, the sensitivity of 99.00 ± 2.00%, the specificity of 97.95 ± 2.51%, the precision of 98.10 ± 2.61%, and the F1 score of 98.51 ± 1.22%. Moreover, our model CSGBBNet performs better when compared with seven previous state-of-the-art methods. In this research, the aim is to link together biomedical research and artificial intelligence and provide some insights into the field of COVID-19 detection.
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spelling pubmed-84704602021-09-27 CSGBBNet: An Explainable Deep Learning Framework for COVID-19 Detection Yao, Xu-Jing Zhu, Zi-Quan Wang, Shui-Hua Zhang, Yu-Dong Diagnostics (Basel) Article The COVID-19 virus has swept the world and brought great impact to various fields, gaining wide attention from all walks of life since the end of 2019. At present, although the global epidemic situation is leveling off and vaccine doses have been administered in a large amount, confirmed cases are still emerging around the world. To make up for the missed diagnosis caused by the uncertainty of nucleic acid polymerase chain reaction (PCR) test, utilizing lung CT examination as a combined detection method to improve the diagnostic rate becomes a necessity. Our research considered the time-consuming and labor-intensive characteristics of the traditional CT analyzing process, and developed an efficient deep learning framework named CSGBBNet to solve the binary classification task of COVID-19 images based on a COVID-Seg model for image preprocessing and a GBBNet for classification. The five runs with random seed on the test set showed our novel framework can rapidly analyze CT scan images and give out effective results for assisting COVID-19 detection, with the mean accuracy of 98.49 ± 1.23%, the sensitivity of 99.00 ± 2.00%, the specificity of 97.95 ± 2.51%, the precision of 98.10 ± 2.61%, and the F1 score of 98.51 ± 1.22%. Moreover, our model CSGBBNet performs better when compared with seven previous state-of-the-art methods. In this research, the aim is to link together biomedical research and artificial intelligence and provide some insights into the field of COVID-19 detection. MDPI 2021-09-18 /pmc/articles/PMC8470460/ /pubmed/34574053 http://dx.doi.org/10.3390/diagnostics11091712 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Yao, Xu-Jing
Zhu, Zi-Quan
Wang, Shui-Hua
Zhang, Yu-Dong
CSGBBNet: An Explainable Deep Learning Framework for COVID-19 Detection
title CSGBBNet: An Explainable Deep Learning Framework for COVID-19 Detection
title_full CSGBBNet: An Explainable Deep Learning Framework for COVID-19 Detection
title_fullStr CSGBBNet: An Explainable Deep Learning Framework for COVID-19 Detection
title_full_unstemmed CSGBBNet: An Explainable Deep Learning Framework for COVID-19 Detection
title_short CSGBBNet: An Explainable Deep Learning Framework for COVID-19 Detection
title_sort csgbbnet: an explainable deep learning framework for covid-19 detection
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8470460/
https://www.ncbi.nlm.nih.gov/pubmed/34574053
http://dx.doi.org/10.3390/diagnostics11091712
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