Cargando…

Comparative Mitogenomes of Two Coreamachilis Species (Microcoryphia: Machilidae) along with Phylogenetic Analyses of Microcoryphia

SIMPLE SUMMARY: Bristletails (Insecta: Microcoryphia) are primarily wingless insects, some of which have been found to exhibit parthenogenesis. In the genus Coreamachilis, parthenogenesis occurs in C. coreanus, whereas sexual reproduction is found in C. songi. Therefore, after obtaining mitochondria...

Descripción completa

Detalles Bibliográficos
Autores principales: Guan, Jia-Yin, Shen, Shi-Qi, Zhang, Zi-Yi, Xu, Xiao-Dong, Storey, Kenneth B., Yu, Dan-Na, Zhang, Jia-Yong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8471023/
https://www.ncbi.nlm.nih.gov/pubmed/34564235
http://dx.doi.org/10.3390/insects12090795
_version_ 1784574351767502848
author Guan, Jia-Yin
Shen, Shi-Qi
Zhang, Zi-Yi
Xu, Xiao-Dong
Storey, Kenneth B.
Yu, Dan-Na
Zhang, Jia-Yong
author_facet Guan, Jia-Yin
Shen, Shi-Qi
Zhang, Zi-Yi
Xu, Xiao-Dong
Storey, Kenneth B.
Yu, Dan-Na
Zhang, Jia-Yong
author_sort Guan, Jia-Yin
collection PubMed
description SIMPLE SUMMARY: Bristletails (Insecta: Microcoryphia) are primarily wingless insects, some of which have been found to exhibit parthenogenesis. In the genus Coreamachilis, parthenogenesis occurs in C. coreanus, whereas sexual reproduction is found in C. songi. Therefore, after obtaining mitochondrial genome sequences of these two species, we analyzed their selection pressure, based on phylogenetic trees of Microcoryphia. However, no positive selection was found in the mitochondrial protein coding genes of either C. coreanus or C. songi. In addition, a long hairpin structure was found between ND1 and 16S rRNA genes in Machilinae and Petrobiinae, which was highly consistent with the phylogenetic results. ABSTRACT: The order Microcoryphia, commonly known as bristletails, is considered as the most primitive one among living insects. Within this order, two species, Coreamachilis coreanus and C. songi (Machilidae: Machilinae), display the following contrasting reproductive strategies: parthenogenesis occurs in C. coreanus, whereas sexual reproduction is found in C. songi. In the present study, the complete mitogenomes of C. coreanus and C. songi were sequenced to compare their mitogenome structure, analyze relationships within the Microcoryphia, and assess adaptive evolution. The length of the mitogenomes of C. coreanus and C. songi were 15,578 bp and 15,570 bp, respectively, and the gene orders were those of typical insects. A long hairpin structure was found between the ND1 and 16S rRNA genes of both species that seem to be characteristic of Machilinae and Petrobiinae species. Phylogenetic assessment of Coreamachilis was conducted using BI and ML analyses with concatenated nucleotide sequences of the 13 protein-coding genes. The results showed that the monophyly of Machilidae, Machilinae, and Petrobiinae was not supported. The genus Coreamachilis (C. coreanus and C. songi) was a sister clade to Allopsontus helanensis, and then the clade of ((C. coreanus + C. songi) + A. helanensis) was a sister clade to A. baii, which suggests that the monophyly of Allopsontus was not supported. Positive selection analysis of the 13 protein-coding genes failed to reveal any positive selection in C. coreanus or C. songi. The long hairpin structures found in Machilinae and Petrobiinae were highly consistent with the phylogenetic results and could potentially be used as an additional molecular characteristic to further discuss relationships within the Microcoryphia.
format Online
Article
Text
id pubmed-8471023
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-84710232021-09-27 Comparative Mitogenomes of Two Coreamachilis Species (Microcoryphia: Machilidae) along with Phylogenetic Analyses of Microcoryphia Guan, Jia-Yin Shen, Shi-Qi Zhang, Zi-Yi Xu, Xiao-Dong Storey, Kenneth B. Yu, Dan-Na Zhang, Jia-Yong Insects Article SIMPLE SUMMARY: Bristletails (Insecta: Microcoryphia) are primarily wingless insects, some of which have been found to exhibit parthenogenesis. In the genus Coreamachilis, parthenogenesis occurs in C. coreanus, whereas sexual reproduction is found in C. songi. Therefore, after obtaining mitochondrial genome sequences of these two species, we analyzed their selection pressure, based on phylogenetic trees of Microcoryphia. However, no positive selection was found in the mitochondrial protein coding genes of either C. coreanus or C. songi. In addition, a long hairpin structure was found between ND1 and 16S rRNA genes in Machilinae and Petrobiinae, which was highly consistent with the phylogenetic results. ABSTRACT: The order Microcoryphia, commonly known as bristletails, is considered as the most primitive one among living insects. Within this order, two species, Coreamachilis coreanus and C. songi (Machilidae: Machilinae), display the following contrasting reproductive strategies: parthenogenesis occurs in C. coreanus, whereas sexual reproduction is found in C. songi. In the present study, the complete mitogenomes of C. coreanus and C. songi were sequenced to compare their mitogenome structure, analyze relationships within the Microcoryphia, and assess adaptive evolution. The length of the mitogenomes of C. coreanus and C. songi were 15,578 bp and 15,570 bp, respectively, and the gene orders were those of typical insects. A long hairpin structure was found between the ND1 and 16S rRNA genes of both species that seem to be characteristic of Machilinae and Petrobiinae species. Phylogenetic assessment of Coreamachilis was conducted using BI and ML analyses with concatenated nucleotide sequences of the 13 protein-coding genes. The results showed that the monophyly of Machilidae, Machilinae, and Petrobiinae was not supported. The genus Coreamachilis (C. coreanus and C. songi) was a sister clade to Allopsontus helanensis, and then the clade of ((C. coreanus + C. songi) + A. helanensis) was a sister clade to A. baii, which suggests that the monophyly of Allopsontus was not supported. Positive selection analysis of the 13 protein-coding genes failed to reveal any positive selection in C. coreanus or C. songi. The long hairpin structures found in Machilinae and Petrobiinae were highly consistent with the phylogenetic results and could potentially be used as an additional molecular characteristic to further discuss relationships within the Microcoryphia. MDPI 2021-09-05 /pmc/articles/PMC8471023/ /pubmed/34564235 http://dx.doi.org/10.3390/insects12090795 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Guan, Jia-Yin
Shen, Shi-Qi
Zhang, Zi-Yi
Xu, Xiao-Dong
Storey, Kenneth B.
Yu, Dan-Na
Zhang, Jia-Yong
Comparative Mitogenomes of Two Coreamachilis Species (Microcoryphia: Machilidae) along with Phylogenetic Analyses of Microcoryphia
title Comparative Mitogenomes of Two Coreamachilis Species (Microcoryphia: Machilidae) along with Phylogenetic Analyses of Microcoryphia
title_full Comparative Mitogenomes of Two Coreamachilis Species (Microcoryphia: Machilidae) along with Phylogenetic Analyses of Microcoryphia
title_fullStr Comparative Mitogenomes of Two Coreamachilis Species (Microcoryphia: Machilidae) along with Phylogenetic Analyses of Microcoryphia
title_full_unstemmed Comparative Mitogenomes of Two Coreamachilis Species (Microcoryphia: Machilidae) along with Phylogenetic Analyses of Microcoryphia
title_short Comparative Mitogenomes of Two Coreamachilis Species (Microcoryphia: Machilidae) along with Phylogenetic Analyses of Microcoryphia
title_sort comparative mitogenomes of two coreamachilis species (microcoryphia: machilidae) along with phylogenetic analyses of microcoryphia
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8471023/
https://www.ncbi.nlm.nih.gov/pubmed/34564235
http://dx.doi.org/10.3390/insects12090795
work_keys_str_mv AT guanjiayin comparativemitogenomesoftwocoreamachilisspeciesmicrocoryphiamachilidaealongwithphylogeneticanalysesofmicrocoryphia
AT shenshiqi comparativemitogenomesoftwocoreamachilisspeciesmicrocoryphiamachilidaealongwithphylogeneticanalysesofmicrocoryphia
AT zhangziyi comparativemitogenomesoftwocoreamachilisspeciesmicrocoryphiamachilidaealongwithphylogeneticanalysesofmicrocoryphia
AT xuxiaodong comparativemitogenomesoftwocoreamachilisspeciesmicrocoryphiamachilidaealongwithphylogeneticanalysesofmicrocoryphia
AT storeykennethb comparativemitogenomesoftwocoreamachilisspeciesmicrocoryphiamachilidaealongwithphylogeneticanalysesofmicrocoryphia
AT yudanna comparativemitogenomesoftwocoreamachilisspeciesmicrocoryphiamachilidaealongwithphylogeneticanalysesofmicrocoryphia
AT zhangjiayong comparativemitogenomesoftwocoreamachilisspeciesmicrocoryphiamachilidaealongwithphylogeneticanalysesofmicrocoryphia