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Solid-State NMR Studies of the Succinate-Acetate Permease from Citrobacter Koseri in Liposomes and Native Nanodiscs

The succinate-acetate permease (SatP) is an anion channel with six transmembrane domains. It forms different oligomers, especially hexamers in the detergent as well as in the membrane. Solid-state NMR studies of SatP were carried out successfully on SatP complexes by reconstructing the protein into...

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Autores principales: Dong, Xing-Qi, Lin, Jing-Yu, Wang, Peng-Fei, Li, Yi, Wang, Jian, Li, Bing, Liao, Jun, Lu, Jun-Xia
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8471396/
https://www.ncbi.nlm.nih.gov/pubmed/34575058
http://dx.doi.org/10.3390/life11090908
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author Dong, Xing-Qi
Lin, Jing-Yu
Wang, Peng-Fei
Li, Yi
Wang, Jian
Li, Bing
Liao, Jun
Lu, Jun-Xia
author_facet Dong, Xing-Qi
Lin, Jing-Yu
Wang, Peng-Fei
Li, Yi
Wang, Jian
Li, Bing
Liao, Jun
Lu, Jun-Xia
author_sort Dong, Xing-Qi
collection PubMed
description The succinate-acetate permease (SatP) is an anion channel with six transmembrane domains. It forms different oligomers, especially hexamers in the detergent as well as in the membrane. Solid-state NMR studies of SatP were carried out successfully on SatP complexes by reconstructing the protein into liposomes or retaining the protein in the native membrane of E. coli., where it was expressed. The comparison of (13)C-(13)C 2D correlation spectra between the two samples showed great similarity, opening the possibility to further study the acetate transport mechanism of SatP in its native membrane environment. Solid-state NMR studies also revealed small chemical shift differences of SatP in the two different membrane systems, indicating the importance of the lipid environment in determining the membrane protein structures and dynamics. Combining different 2D SSNMR spectra, chemical shift assignments were made on some sites, consistent with the helical structures in the transmembrane domains. In the end, we pointed out the limitation in the sensitivity for membrane proteins with such a size, and also indicated possible ways to overcome it.
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spelling pubmed-84713962021-09-27 Solid-State NMR Studies of the Succinate-Acetate Permease from Citrobacter Koseri in Liposomes and Native Nanodiscs Dong, Xing-Qi Lin, Jing-Yu Wang, Peng-Fei Li, Yi Wang, Jian Li, Bing Liao, Jun Lu, Jun-Xia Life (Basel) Article The succinate-acetate permease (SatP) is an anion channel with six transmembrane domains. It forms different oligomers, especially hexamers in the detergent as well as in the membrane. Solid-state NMR studies of SatP were carried out successfully on SatP complexes by reconstructing the protein into liposomes or retaining the protein in the native membrane of E. coli., where it was expressed. The comparison of (13)C-(13)C 2D correlation spectra between the two samples showed great similarity, opening the possibility to further study the acetate transport mechanism of SatP in its native membrane environment. Solid-state NMR studies also revealed small chemical shift differences of SatP in the two different membrane systems, indicating the importance of the lipid environment in determining the membrane protein structures and dynamics. Combining different 2D SSNMR spectra, chemical shift assignments were made on some sites, consistent with the helical structures in the transmembrane domains. In the end, we pointed out the limitation in the sensitivity for membrane proteins with such a size, and also indicated possible ways to overcome it. MDPI 2021-08-31 /pmc/articles/PMC8471396/ /pubmed/34575058 http://dx.doi.org/10.3390/life11090908 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Dong, Xing-Qi
Lin, Jing-Yu
Wang, Peng-Fei
Li, Yi
Wang, Jian
Li, Bing
Liao, Jun
Lu, Jun-Xia
Solid-State NMR Studies of the Succinate-Acetate Permease from Citrobacter Koseri in Liposomes and Native Nanodiscs
title Solid-State NMR Studies of the Succinate-Acetate Permease from Citrobacter Koseri in Liposomes and Native Nanodiscs
title_full Solid-State NMR Studies of the Succinate-Acetate Permease from Citrobacter Koseri in Liposomes and Native Nanodiscs
title_fullStr Solid-State NMR Studies of the Succinate-Acetate Permease from Citrobacter Koseri in Liposomes and Native Nanodiscs
title_full_unstemmed Solid-State NMR Studies of the Succinate-Acetate Permease from Citrobacter Koseri in Liposomes and Native Nanodiscs
title_short Solid-State NMR Studies of the Succinate-Acetate Permease from Citrobacter Koseri in Liposomes and Native Nanodiscs
title_sort solid-state nmr studies of the succinate-acetate permease from citrobacter koseri in liposomes and native nanodiscs
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8471396/
https://www.ncbi.nlm.nih.gov/pubmed/34575058
http://dx.doi.org/10.3390/life11090908
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