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Quantitative Trait Locus Mapping for Drought Tolerance in Soybean Recombinant Inbred Line Population

Improving drought stress tolerance of soybean could be an effective way to minimize the yield reduction in the drought prevailing regions. Identification of drought tolerance-related quantitative trait loci (QTLs) is useful to facilitate the development of stress-tolerant varieties. This study aimed...

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Autores principales: Dhungana, Sanjeev Kumar, Park, Ji-Hee, Oh, Jae-Hyeon, Kang, Beom-Kyu, Seo, Jeong-Hyun, Sung, Jung-Sook, Kim, Hong-Sik, Shin, Sang-Ouk, Baek, In-Youl, Jung, Chan-Sik
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8471639/
https://www.ncbi.nlm.nih.gov/pubmed/34579348
http://dx.doi.org/10.3390/plants10091816
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author Dhungana, Sanjeev Kumar
Park, Ji-Hee
Oh, Jae-Hyeon
Kang, Beom-Kyu
Seo, Jeong-Hyun
Sung, Jung-Sook
Kim, Hong-Sik
Shin, Sang-Ouk
Baek, In-Youl
Jung, Chan-Sik
author_facet Dhungana, Sanjeev Kumar
Park, Ji-Hee
Oh, Jae-Hyeon
Kang, Beom-Kyu
Seo, Jeong-Hyun
Sung, Jung-Sook
Kim, Hong-Sik
Shin, Sang-Ouk
Baek, In-Youl
Jung, Chan-Sik
author_sort Dhungana, Sanjeev Kumar
collection PubMed
description Improving drought stress tolerance of soybean could be an effective way to minimize the yield reduction in the drought prevailing regions. Identification of drought tolerance-related quantitative trait loci (QTLs) is useful to facilitate the development of stress-tolerant varieties. This study aimed to identify the QTLs for drought tolerance in soybean using a recombinant inbred line (RIL) population developed from the cross between a drought-tolerant ‘PI416937’ and a susceptible ‘Cheonsang’ cultivar. Phenotyping was done with a weighted drought coefficient derived from the vegetative and reproductive traits. The genetic map was constructed using 2648 polymorphic SNP markers that distributed on 20 chromosomes with a mean genetic distance of 1.36 cM between markers. A total of 10 QTLs with 3.52–4.7 logarithm of odds value accounting for up to 12.9% phenotypic variance were identified on seven chromosomes. Five chromosomes—2, 7, 10, 14, and 20—contained one QTL each, and chromosomes 1 and 19 harbored two and three QTLs, respectively. The chromosomal locations of seven QTLs overlapped or located close to the related QTLs and/or potential candidate genes reported earlier. The QTLs and closely linked markers could be utilized in maker-assisted selection to accelerate the breeding for drought tolerance in soybean.
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spelling pubmed-84716392021-09-28 Quantitative Trait Locus Mapping for Drought Tolerance in Soybean Recombinant Inbred Line Population Dhungana, Sanjeev Kumar Park, Ji-Hee Oh, Jae-Hyeon Kang, Beom-Kyu Seo, Jeong-Hyun Sung, Jung-Sook Kim, Hong-Sik Shin, Sang-Ouk Baek, In-Youl Jung, Chan-Sik Plants (Basel) Article Improving drought stress tolerance of soybean could be an effective way to minimize the yield reduction in the drought prevailing regions. Identification of drought tolerance-related quantitative trait loci (QTLs) is useful to facilitate the development of stress-tolerant varieties. This study aimed to identify the QTLs for drought tolerance in soybean using a recombinant inbred line (RIL) population developed from the cross between a drought-tolerant ‘PI416937’ and a susceptible ‘Cheonsang’ cultivar. Phenotyping was done with a weighted drought coefficient derived from the vegetative and reproductive traits. The genetic map was constructed using 2648 polymorphic SNP markers that distributed on 20 chromosomes with a mean genetic distance of 1.36 cM between markers. A total of 10 QTLs with 3.52–4.7 logarithm of odds value accounting for up to 12.9% phenotypic variance were identified on seven chromosomes. Five chromosomes—2, 7, 10, 14, and 20—contained one QTL each, and chromosomes 1 and 19 harbored two and three QTLs, respectively. The chromosomal locations of seven QTLs overlapped or located close to the related QTLs and/or potential candidate genes reported earlier. The QTLs and closely linked markers could be utilized in maker-assisted selection to accelerate the breeding for drought tolerance in soybean. MDPI 2021-08-31 /pmc/articles/PMC8471639/ /pubmed/34579348 http://dx.doi.org/10.3390/plants10091816 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Dhungana, Sanjeev Kumar
Park, Ji-Hee
Oh, Jae-Hyeon
Kang, Beom-Kyu
Seo, Jeong-Hyun
Sung, Jung-Sook
Kim, Hong-Sik
Shin, Sang-Ouk
Baek, In-Youl
Jung, Chan-Sik
Quantitative Trait Locus Mapping for Drought Tolerance in Soybean Recombinant Inbred Line Population
title Quantitative Trait Locus Mapping for Drought Tolerance in Soybean Recombinant Inbred Line Population
title_full Quantitative Trait Locus Mapping for Drought Tolerance in Soybean Recombinant Inbred Line Population
title_fullStr Quantitative Trait Locus Mapping for Drought Tolerance in Soybean Recombinant Inbred Line Population
title_full_unstemmed Quantitative Trait Locus Mapping for Drought Tolerance in Soybean Recombinant Inbred Line Population
title_short Quantitative Trait Locus Mapping for Drought Tolerance in Soybean Recombinant Inbred Line Population
title_sort quantitative trait locus mapping for drought tolerance in soybean recombinant inbred line population
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8471639/
https://www.ncbi.nlm.nih.gov/pubmed/34579348
http://dx.doi.org/10.3390/plants10091816
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