Cargando…

A Drive towards Thermodynamic Efficiency for Dissipative Structures in Chemical Reaction Networks

Dissipative accounts of structure formation show that the self-organisation of complex structures is thermodynamically favoured, whenever these structures dissipate free energy that could not be accessed otherwise. These structures therefore open transition channels for the state of the universe to...

Descripción completa

Detalles Bibliográficos
Autores principales: Ueltzhöffer, Kai, Da Costa, Lancelot, Cialfi, Daniela, Friston, Karl
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8472781/
https://www.ncbi.nlm.nih.gov/pubmed/34573740
http://dx.doi.org/10.3390/e23091115
_version_ 1784574822848659456
author Ueltzhöffer, Kai
Da Costa, Lancelot
Cialfi, Daniela
Friston, Karl
author_facet Ueltzhöffer, Kai
Da Costa, Lancelot
Cialfi, Daniela
Friston, Karl
author_sort Ueltzhöffer, Kai
collection PubMed
description Dissipative accounts of structure formation show that the self-organisation of complex structures is thermodynamically favoured, whenever these structures dissipate free energy that could not be accessed otherwise. These structures therefore open transition channels for the state of the universe to move from a frustrated, metastable state to another metastable state of higher entropy. However, these accounts apply as well to relatively simple, dissipative systems, such as convection cells, hurricanes, candle flames, lightning strikes, or mechanical cracks, as they do to complex biological systems. Conversely, interesting computational properties—that characterize complex biological systems, such as efficient, predictive representations of environmental dynamics—can be linked to the thermodynamic efficiency of underlying physical processes. However, the potential mechanisms that underwrite the selection of dissipative structures with thermodynamically efficient subprocesses is not completely understood. We address these mechanisms by explaining how bifurcation-based, work-harvesting processes—required to sustain complex dissipative structures—might be driven towards thermodynamic efficiency. We first demonstrate a simple mechanism that leads to self-selection of efficient dissipative structures in a stochastic chemical reaction network, when the dissipated driving chemical potential difference is decreased. We then discuss how such a drive can emerge naturally in a hierarchy of self-similar dissipative structures, each feeding on the dissipative structures of a previous level, when moving away from the initial, driving disequilibrium.
format Online
Article
Text
id pubmed-8472781
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-84727812021-09-28 A Drive towards Thermodynamic Efficiency for Dissipative Structures in Chemical Reaction Networks Ueltzhöffer, Kai Da Costa, Lancelot Cialfi, Daniela Friston, Karl Entropy (Basel) Article Dissipative accounts of structure formation show that the self-organisation of complex structures is thermodynamically favoured, whenever these structures dissipate free energy that could not be accessed otherwise. These structures therefore open transition channels for the state of the universe to move from a frustrated, metastable state to another metastable state of higher entropy. However, these accounts apply as well to relatively simple, dissipative systems, such as convection cells, hurricanes, candle flames, lightning strikes, or mechanical cracks, as they do to complex biological systems. Conversely, interesting computational properties—that characterize complex biological systems, such as efficient, predictive representations of environmental dynamics—can be linked to the thermodynamic efficiency of underlying physical processes. However, the potential mechanisms that underwrite the selection of dissipative structures with thermodynamically efficient subprocesses is not completely understood. We address these mechanisms by explaining how bifurcation-based, work-harvesting processes—required to sustain complex dissipative structures—might be driven towards thermodynamic efficiency. We first demonstrate a simple mechanism that leads to self-selection of efficient dissipative structures in a stochastic chemical reaction network, when the dissipated driving chemical potential difference is decreased. We then discuss how such a drive can emerge naturally in a hierarchy of self-similar dissipative structures, each feeding on the dissipative structures of a previous level, when moving away from the initial, driving disequilibrium. MDPI 2021-08-27 /pmc/articles/PMC8472781/ /pubmed/34573740 http://dx.doi.org/10.3390/e23091115 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Ueltzhöffer, Kai
Da Costa, Lancelot
Cialfi, Daniela
Friston, Karl
A Drive towards Thermodynamic Efficiency for Dissipative Structures in Chemical Reaction Networks
title A Drive towards Thermodynamic Efficiency for Dissipative Structures in Chemical Reaction Networks
title_full A Drive towards Thermodynamic Efficiency for Dissipative Structures in Chemical Reaction Networks
title_fullStr A Drive towards Thermodynamic Efficiency for Dissipative Structures in Chemical Reaction Networks
title_full_unstemmed A Drive towards Thermodynamic Efficiency for Dissipative Structures in Chemical Reaction Networks
title_short A Drive towards Thermodynamic Efficiency for Dissipative Structures in Chemical Reaction Networks
title_sort drive towards thermodynamic efficiency for dissipative structures in chemical reaction networks
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8472781/
https://www.ncbi.nlm.nih.gov/pubmed/34573740
http://dx.doi.org/10.3390/e23091115
work_keys_str_mv AT ueltzhofferkai adrivetowardsthermodynamicefficiencyfordissipativestructuresinchemicalreactionnetworks
AT dacostalancelot adrivetowardsthermodynamicefficiencyfordissipativestructuresinchemicalreactionnetworks
AT cialfidaniela adrivetowardsthermodynamicefficiencyfordissipativestructuresinchemicalreactionnetworks
AT fristonkarl adrivetowardsthermodynamicefficiencyfordissipativestructuresinchemicalreactionnetworks
AT ueltzhofferkai drivetowardsthermodynamicefficiencyfordissipativestructuresinchemicalreactionnetworks
AT dacostalancelot drivetowardsthermodynamicefficiencyfordissipativestructuresinchemicalreactionnetworks
AT cialfidaniela drivetowardsthermodynamicefficiencyfordissipativestructuresinchemicalreactionnetworks
AT fristonkarl drivetowardsthermodynamicefficiencyfordissipativestructuresinchemicalreactionnetworks