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Ambisense polarity of genome RNA of orthomyxoviruses and coronaviruses

Influenza viruses and coronaviruses have linear single-stranded RNA genomes with negative and positive sense polarities and genes encoded in viral genomes are expressed in these viruses as positive and negative genes, respectively. Here we consider a novel gene identified in viral genomes in opposit...

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Autor principal: Zhirnov, Oleg
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Baishideng Publishing Group Inc 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8474974/
https://www.ncbi.nlm.nih.gov/pubmed/34631475
http://dx.doi.org/10.5501/wjv.v10.i5.256
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author Zhirnov, Oleg
author_facet Zhirnov, Oleg
author_sort Zhirnov, Oleg
collection PubMed
description Influenza viruses and coronaviruses have linear single-stranded RNA genomes with negative and positive sense polarities and genes encoded in viral genomes are expressed in these viruses as positive and negative genes, respectively. Here we consider a novel gene identified in viral genomes in opposite direction, as positive in influenza and negative in coronaviruses, suggesting an ambisense genome strategy for both virus families. Noteworthy, the identified novel genes colocolized in the same RNA regions of viral genomes, where the previously known opposite genes are encoded, a so-called ambisense stacking architecture of genes in virus genome. It seems likely, that ambisense gene stacking in influenza and coronavirus families significantly increases genetic potential and virus diversity to extend virus-host adaptation pathways in nature. These data imply that ambisense viruses may have a multivirion mechanism, like "a dark side of the Moon", allowing production of the heterogeneous population of virions expressed through positive and negative sense genome strategies.
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spelling pubmed-84749742021-10-08 Ambisense polarity of genome RNA of orthomyxoviruses and coronaviruses Zhirnov, Oleg World J Virol Minireviews Influenza viruses and coronaviruses have linear single-stranded RNA genomes with negative and positive sense polarities and genes encoded in viral genomes are expressed in these viruses as positive and negative genes, respectively. Here we consider a novel gene identified in viral genomes in opposite direction, as positive in influenza and negative in coronaviruses, suggesting an ambisense genome strategy for both virus families. Noteworthy, the identified novel genes colocolized in the same RNA regions of viral genomes, where the previously known opposite genes are encoded, a so-called ambisense stacking architecture of genes in virus genome. It seems likely, that ambisense gene stacking in influenza and coronavirus families significantly increases genetic potential and virus diversity to extend virus-host adaptation pathways in nature. These data imply that ambisense viruses may have a multivirion mechanism, like "a dark side of the Moon", allowing production of the heterogeneous population of virions expressed through positive and negative sense genome strategies. Baishideng Publishing Group Inc 2021-09-25 2021-09-25 /pmc/articles/PMC8474974/ /pubmed/34631475 http://dx.doi.org/10.5501/wjv.v10.i5.256 Text en ©The Author(s) 2021. Published by Baishideng Publishing Group Inc. All rights reserved. https://creativecommons.org/licenses/by-nc/4.0/This article is an open-access article that was selected by an in-house editor and fully peer-reviewed by external reviewers. It is distributed in accordance with the Creative Commons Attribution NonCommercial (CC BY-NC 4.0) license, which permits others to distribute, remix, adapt, build upon this work non-commercially, and license their derivative works on different terms, provided the original work is properly cited and the use is non-commercial. See: http://creativecommons.org/Licenses/by-nc/4.0/
spellingShingle Minireviews
Zhirnov, Oleg
Ambisense polarity of genome RNA of orthomyxoviruses and coronaviruses
title Ambisense polarity of genome RNA of orthomyxoviruses and coronaviruses
title_full Ambisense polarity of genome RNA of orthomyxoviruses and coronaviruses
title_fullStr Ambisense polarity of genome RNA of orthomyxoviruses and coronaviruses
title_full_unstemmed Ambisense polarity of genome RNA of orthomyxoviruses and coronaviruses
title_short Ambisense polarity of genome RNA of orthomyxoviruses and coronaviruses
title_sort ambisense polarity of genome rna of orthomyxoviruses and coronaviruses
topic Minireviews
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8474974/
https://www.ncbi.nlm.nih.gov/pubmed/34631475
http://dx.doi.org/10.5501/wjv.v10.i5.256
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