The complete chloroplast genome sequence of Thrixspermum amplexicaule (Orchidaceae, Aeridinae)

The complete chloroplast genome sequence of Thrixspermum amplexicaule was assembled and analyzed in this work. The total chloroplast genome size of T. amplexicaule was 148,124 bp in length, containing a large single-copy (LSC) region of 86,079 bp, a small single-copy (SSC) region of 10,799 bp, and a...

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Autores principales: He, Zu-Xia, Li, Ting-Zhang, Zheng, Xi-Long, Gu, Yu-Feng, Zhang, Rui, Chen, Jian-Bing
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8475115/
https://www.ncbi.nlm.nih.gov/pubmed/34589585
http://dx.doi.org/10.1080/23802359.2021.1959459
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author He, Zu-Xia
Li, Ting-Zhang
Zheng, Xi-Long
Gu, Yu-Feng
Zhang, Rui
Chen, Jian-Bing
author_facet He, Zu-Xia
Li, Ting-Zhang
Zheng, Xi-Long
Gu, Yu-Feng
Zhang, Rui
Chen, Jian-Bing
author_sort He, Zu-Xia
collection PubMed
description The complete chloroplast genome sequence of Thrixspermum amplexicaule was assembled and analyzed in this work. The total chloroplast genome size of T. amplexicaule was 148,124 bp in length, containing a large single-copy (LSC) region of 86,079 bp, a small single-copy (SSC) region of 10,799 bp, and a pair of inverted repeat (IR) regions of 25,623 bp. The GC content of T. amplexicaule was 36.4%. It encoded a total of 120 unique genes, including 75 protein-coding genes, 37 tRNA genes, and eight rRNA genes. The results of phylogenetic analysis strongly supported that all four samples of Thrixspermum are monophyletic and T. amplexicaule was closely related to T. centipeda.
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spelling pubmed-84751152021-09-28 The complete chloroplast genome sequence of Thrixspermum amplexicaule (Orchidaceae, Aeridinae) He, Zu-Xia Li, Ting-Zhang Zheng, Xi-Long Gu, Yu-Feng Zhang, Rui Chen, Jian-Bing Mitochondrial DNA B Resour Mitogenome Announcement The complete chloroplast genome sequence of Thrixspermum amplexicaule was assembled and analyzed in this work. The total chloroplast genome size of T. amplexicaule was 148,124 bp in length, containing a large single-copy (LSC) region of 86,079 bp, a small single-copy (SSC) region of 10,799 bp, and a pair of inverted repeat (IR) regions of 25,623 bp. The GC content of T. amplexicaule was 36.4%. It encoded a total of 120 unique genes, including 75 protein-coding genes, 37 tRNA genes, and eight rRNA genes. The results of phylogenetic analysis strongly supported that all four samples of Thrixspermum are monophyletic and T. amplexicaule was closely related to T. centipeda. Taylor & Francis 2021-09-24 /pmc/articles/PMC8475115/ /pubmed/34589585 http://dx.doi.org/10.1080/23802359.2021.1959459 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
He, Zu-Xia
Li, Ting-Zhang
Zheng, Xi-Long
Gu, Yu-Feng
Zhang, Rui
Chen, Jian-Bing
The complete chloroplast genome sequence of Thrixspermum amplexicaule (Orchidaceae, Aeridinae)
title The complete chloroplast genome sequence of Thrixspermum amplexicaule (Orchidaceae, Aeridinae)
title_full The complete chloroplast genome sequence of Thrixspermum amplexicaule (Orchidaceae, Aeridinae)
title_fullStr The complete chloroplast genome sequence of Thrixspermum amplexicaule (Orchidaceae, Aeridinae)
title_full_unstemmed The complete chloroplast genome sequence of Thrixspermum amplexicaule (Orchidaceae, Aeridinae)
title_short The complete chloroplast genome sequence of Thrixspermum amplexicaule (Orchidaceae, Aeridinae)
title_sort complete chloroplast genome sequence of thrixspermum amplexicaule (orchidaceae, aeridinae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8475115/
https://www.ncbi.nlm.nih.gov/pubmed/34589585
http://dx.doi.org/10.1080/23802359.2021.1959459
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